Fervidobacterium nodosum: Fnod_1031
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Entry
Fnod_1031 CDS
T00579
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fno
Fervidobacterium nodosum
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fno03016
]
Fnod_1031
Enzymes [BR:
fno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Fnod_1031
Transfer RNA biogenesis [BR:
fno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Fnod_1031
Prokaryotic type
Fnod_1031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
ABS60880
UniProt:
A7HLU7
LinkDB
All DBs
Position
1129078..1130004
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AA seq
308 aa
AA seq
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MEQKIISGLLLVDKDKGPTSHDIVNKVRNIFNVKQVGHAGTLDPFATGLLLVGIGKATRL
LEYLQGETKVYKVKMQLGIITDTFDITGTVMEENNINNSEREIIEAINSFIGTYKQVPPA
YSAKKYQGKKLYELAREGKIINLPPREVTIYEISDIKIELPYVEFTTKVSAGTYIRSLCM
DIGYKLGCGATTVELRRTKVGKFDVGNAVRIDENIEKVKGHVIPMEEILDLPKIVILDKT
KVYNGIHPKVEDLISYDNFKKDDLVQIFADGKLIAIAMAERNSSFIETLKKQSRNERILT
LEKVFRLD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaaataatttcaggactcttactcgttgataaagataaagggccaacatca
catgatatagttaacaaagtcagaaatattttcaatgtaaaacaagtaggacacgctgga
acgttagacccattcgcaacgggcttattgcttgtaggaattggtaaagcaactagactt
cttgaatacctacaaggcgaaacaaaagtatacaaagtaaaaatgcaattaggaattatc
acagacacattcgatataaccggtacagtaatggaagaaaataacattaacaactcggaa
agggaaatcatagaagcgattaattcatttatcggcacttacaagcaggttccacctgcc
tattctgcgaaaaaataccagggtaaaaagttgtacgaacttgcaagagaaggcaagata
ataaatcttccaccaagagaagtaacgatatatgaaatatctgatataaaaatcgaatta
ccatacgttgaattcacaacaaaagtctccgcgggaacatacataagaagcctttgtatg
gatataggctacaaactaggctgcggagcaaccacagttgaattgagaagaacaaaagta
ggaaaatttgatgttggaaatgcggtaagaatagatgaaaacattgaaaaggtaaaagga
catgtaatccctatggaagaaatcttagacttaccaaaaattgtcatcttagataaaaca
aaagtatacaacggaattcacccaaaagtggaagatttaatatcatacgataatttcaaa
aaagatgacttagttcaaatatttgccgatggaaaattaatagccatcgcaatggctgaa
cgtaactcaagctttatagaaacactaaaaaaacaatcgagaaacgagcgcatattaact
ttggaaaaagtatttagacttgattag
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