Fervidobacterium nodosum: Fnod_1543
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Entry
Fnod_1543 CDS
T00579
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fno
Fervidobacterium nodosum
Pathway
fno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fnod_1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fno03019
]
Fnod_1543
03110 Chaperones and folding catalysts [BR:
fno03110
]
Fnod_1543
03029 Mitochondrial biogenesis [BR:
fno03029
]
Fnod_1543
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fno04147
]
Fnod_1543
Enzymes [BR:
fno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Fnod_1543
Messenger RNA biogenesis [BR:
fno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Fnod_1543
Chaperones and folding catalysts [BR:
fno03110
]
Heat shock proteins
HSP60 / Chaperonin
Fnod_1543
Mitochondrial biogenesis [BR:
fno03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Fnod_1543
Exosome [BR:
fno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Fnod_1543
Exosomal proteins of other body fluids (saliva and urine)
Fnod_1543
Exosomal proteins of breast cancer cells
Fnod_1543
Exosomal proteins of colorectal cancer cells
Fnod_1543
Exosomal proteins of bladder cancer cells
Fnod_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
REF
Motif
Other DBs
NCBI-ProteinID:
ABS61386
UniProt:
A7HNA3
LinkDB
All DBs
Position
complement(1674937..1676553)
Genome browser
AA seq
538 aa
AA seq
DB search
MAKLLRYSEEARRSLEAGVDAVANAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIE
LEDKFANLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKMVAAGANPILIKKGID
KATSKVVEEIKKISKKLSSTEDIAHVASISANSEEIGKLIAEAMEKVGEDGVITVEDSKT
IDTYVEFTEGMQFDRGYISPYFVTDPEKMEVVYNEPFILITDRKLSNVKPLIPILEKVAQ
TGRPLVIIAEDVEGEVLTTLVLNKLKGTLNTVAVKAPGFGDRRKAMLQDIAILTGGIVAS
EEVGINLEDLTLQDLGRADVVRVKKDETIIVGGKGKPEEIKKRVAQIKAQIEQTTSEYEK
ETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRA
RKVLEPVLNELTGDEKLGAQIVYNALEAPIRQIALNAGYDGAIIIHNVLSKDDVAYGFDA
LKGEYCNMYERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKPAAPEMPEY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttattaagatacagtgaagaagcaagaaggtcattagaagcaggtgtagat
gcagtcgctaatgcagttaagattacattgggtccaaaaggtagaaatgttgttattgaa
aaatcatggggcagcccaacaattacaaatgatggtgtctctatagcaaaagaaattgaa
ttagaagacaaatttgcaaatcttggtgcacaacttgttaaagaagttgcaagcaagact
aatgatgttgctggtgacggtacaacaacggctacagttcttgctcaagcgatgattaaa
gaaggactcaagatggtagcagctggcgcaaatccgatattgattaaaaaaggtatcgac
aaagcaacatcaaaggttgttgaagagattaagaaaatttcaaagaaactttcaagcaca
gaggatatcgcacacgtcgcatcaatcagtgcaaatagtgaagaaattggtaaattaatc
gcagaagcaatggaaaaagttggcgaagatggagttatcacagtcgaagatagcaaaaca
attgatacttacgttgaatttacagaaggtatgcaattcgacagaggttacatctcacca
tactttgtaacagacccagaaaagatggaagtcgtttacaatgaaccattcatactcatc
acagatagaaaactttcaaacgttaaaccgctcatccctattcttgaaaaagtagctcaa
acaggaagaccacttgtaattatcgcagaagatgttgaaggtgaagttctcacaacgtta
gttctcaacaaactcaagggaacacttaacaccgtagcagttaaagctcctggcttcggt
gacagaagaaaagcaatgttacaagatatagcaattctcacaggtggtattgtagcaagc
gaagaagttggaattaacctcgaagacctcacactccaagaccttggtagagcagacgtt
gtaagagttaagaaagacgaaacaataattgtcggcggaaaaggcaagccagaagaaatc
aagaagagagttgcacaaatcaaagcacaaatcgagcaaacaacaagcgaatacgaaaaa
gaaacactccaagaaagaatggcaaaattagctggtggtgtcgcagtaattaaggttggt
gcagcaacagaaacagaacttaaagaaaagaaacacagaattgaagacgcactcagcgca
acaagagcagctgttgaagaaggtatcgtccctggcggtggaattacattacttagagca
agaaaagttcttgaaccagttctcaatgaacttaccggtgacgaaaaactcggtgctcaa
atagtctacaatgctctcgaagcaccaattagacaaatcgctctcaacgcaggttacgat
ggtgcaataattatccacaacgtactttcaaaagatgatgtagcatacggttttgatgcc
cttaaaggtgaatactgtaacatgtacgaacgtggaattatcgacccagcaaaggttaca
agaagcgctctacaaaacgcagcatcaattgcgggtatgctccttacaacagaagtgctc
gtagttgaaaaaccagaagaaaagaaaccagcagcacctgaaatgccagaatattaa
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