| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
fno Fervidobacterium nodosum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:fno00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fnod_1782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:fno03021]
Fnod_1782
03400 DNA repair and recombination proteins [BR:fno03400]
Fnod_1782
Enzymes [BR:fno01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fnod_1782
Transcription machinery [BR:fno03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fnod_1782
DNA repair and recombination proteins [BR:fno03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fnod_1782
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1937445..1940993)
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| AA seq |
1182 aa
MKTYQIGKRTRYSFGKVDEIIQVPDLVEIQRKSFEELLNHGILRILKKFSPITSAKVEGR
REKGFNLEFVNFRVGAPLHSVEECKQRLLTYVAPFYATVRVTDVSTGEMREEEVSLGNYP
IMTENQTFVINGVERVVVSQLVRSPGVYFVEEPTKNIGAKPIYLAHFLPVRGVWLEIMLN
LNDETLYARIDRRKRLNLFLVLKTLGFQNDIDILSLFPAYLDVEDDYSLKQSEGIIILEK
IVSKSGEVIAEKGSVLTSTLVEILREHGIEKIKVVNNYMFKTYMKLKEKLKMPLEENISE
LRAFMEIYKELRPGEVFRYNAAKSYWNNLYFNEERFELSEVGRYKMNKKLTNAYRKYLIE
IEGRNPKSVERIEYEEKSNALTPIDIILVIRMLLETEKHPETLDTKDHLSNKRVKTVGEL
IGSEFERAFSKSIHQIQEKLATYTSLDKISIPSLINLRNVIASLNSFFATNPLSQFMDQV
NPIAELTHKRRLTAVGPGGLKRERARFEVRDVHHSHYGRMCPIETPEGGNIGLITSLSVY
ATIDEYGFLVTPYRRITNGKLANEVVYLAADEEENYKIASVTIAFDKEGNIIQERVPVRY
LEKIVYVHKNEVDLVDISPKQIVSVTTSLIPFLEHDDANRALMGSNMQRQAVPVIKPEAP
FVGTGMEYAAAIYSGHVVLAKNDGVVKKVDGRKIIIHRIDENGQLMYDKKGNPIIDEYTL
LKYVRSNQDTSITQKPIVNVGDFVKKGSPIADGPATDNGELALGKNVLVAFLPWEGYNFE
DAILVSEELLEEDTFTSVHIEVYETTARETRVGPEEITSEIPNVSKENIRNLDENGIIRI
GAYVGKQKYFTSQDILVGKVTPKGESDASPEEKIMRSVFGEKGKDVKDSSLRVPHGVEGR
VIGVHVFHKEEVGDLGPGVNTLVRVYLATRKPLEVGDKLAGRHGNKGVVSMILPKEDMPF
LPDGTPVQVVLSPLGVPSRMNIGQVLETSLGWLAKLTNRYFATPVFDGAKEDDILPELYK
VRETLNLHHGDDPNNPSGKVTLRDGRTGKEFDFPVLVGYMYIMKLIHIARDKIHARATGP
YSLIHQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLNEMLTVKSDDIKGRTEVYKAIMK
SKNLPEPGLPESFKVLVRELKGLALDVRVYDEHGNEIDIEKL |
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| NT seq |
3549 nt +upstreamnt +downstreamnt
atgaaaacctaccaaattggtaaacgtacaaggtattctttcggtaaggttgatgagatt
atccaagtacccgaccttgttgaaatccagcgaaagtctttcgaagagcttttgaaccat
ggtattttacgtattcttaagaagtttagccctataacttctgcaaaagttgaaggcaga
agagagaagggcttcaatcttgagtttgtaaacttcagagttggtgcgccacttcacagt
gttgaagaatgtaagcaaagattgttaacttatgtagctccattctatgcaacagttagg
gtcacagatgtttcaaccggagaaatgcgtgaagaagaggtttctcttggaaactaccca
ataatgactgaaaatcaaacttttgtaattaacggtgttgaaagagttgttgtaagtcaa
cttgttagaagccctggcgtatattttgtcgaagaaccaacaaaaaatattggtgctaaa
cctatataccttgctcattttctaccggttcgtggcgtatggttagaaataatgcttaac
ttaaacgatgaaacactttacgcaagaattgatagaagaaaaagactcaatctattcctt
gtcttaaaaacacttggatttcaaaatgatatagatatactctcgctcttcccggcttac
ttagatgtcgaagacgactattctttaaaacaatctgaaggaataattattctcgagaaa
attgtttcaaaaagcggagaagtaattgcagaaaaagggtcagttctaacttcgacactt
gtcgaaatattaagagaacatggaattgaaaaaattaaagttgttaataactatatgttc
aaaacatacatgaagcttaaagaaaaactcaaaatgccattagaagaaaatatcagtgag
ttaagagctttcatggaaatatacaaggaattaagacccggagaagtattcagatacaat
gccgcaaaatcatattggaataacctttactttaatgaagaaaggtttgaactttcagaa
gtcggtcgctataaaatgaataaaaaattgacaaatgcctatagaaaatatttgattgaa
atagaaggaagaaatccaaaaagtgttgaacggatagaatacgaagaaaaatcgaatgct
cttacaccaatagatattatcttggttattagaatgctccttgaaacagaaaaacatcca
gaaacgttggataccaaagaccatctatcgaataagagagttaaaacagttggtgaactt
ataggttcagaatttgaaagagcattttcgaaatcaatacatcaaatacaagaaaaatta
gctacctatacaagtttagataaaatatctattccaagtttaataaacttgagaaatgtt
atagcttcattgaatagcttcttcgctacaaacccactctcccaatttatggaccaagta
aatccaattgctgaattaacgcacaaaagaaggctaactgcagttggacctggcggtcta
aaaagagaaagagcaagatttgaagttcgtgacgttcaccactcacactatgggaggatg
tgtcctatcgaaacacctgaaggtggtaacattggtcttataacatcactttcagtttat
gcgactattgatgaatacggatttttggtaacaccttacagaagaatcaccaatggaaaa
ttagcaaacgaagtggtctatttagctgctgatgaggaagaaaactacaaaatagcatct
gtaacaatcgcttttgacaaagaagggaatataatacaagaaagggtccccgtaaggtac
cttgaaaaaatagtttacgttcacaaaaatgaagtagatcttgtagatatctctccaaag
cagatagttagtgttacaacatcacttataccattcttggaacacgatgacgcaaatcgc
gcgttgatgggttcaaacatgcaaagacaagctgttcctgttataaagccagaagcacca
tttgtaggtacaggaatggaatacgcagcggctatttactcaggtcacgtagtgttagca
aagaatgatggtgtagttaaaaaggttgatggtagaaaaattatcattcacagaatagat
gaaaatggtcaactaatgtacgataaaaaaggtaacccaataattgacgaatacacactt
ctaaaatatgtaaggtcaaaccaagatacatcaataacgcaaaaaccaatcgtcaatgtt
ggtgatttcgtaaagaaaggctcgccaatcgctgatggtccagcaactgacaatggagaa
cttgcacttggaaagaatgtactcgttgcatttttaccatgggaaggttacaactttgaa
gacgcaatattggtaagtgaagagcttcttgaggaagatacatttacatccgtacatata
gaggtttacgaaacaacagcaagagaaacaagagttggtccagaagaaattacatcagaa
ataccaaatgtttcaaaagaaaatattagaaaccttgacgagaatggaataataaggata
ggtgcgtacgttggtaaacaaaaatactttacatcacaggatatattagttggtaaagta
acaccaaaaggtgaaagtgacgcaagtccagaagaaaaaattatgagatcagtctttggt
gagaaaggtaaagatgtaaaggattcttcattgagggtaccacatggtgttgaaggaaga
gttataggcgttcacgttttccataaagaagaagtcggtgatttgggacctggcgtaaat
acacttgtgagagtctacttggcaactaggaaaccattagaagtcggtgacaaactcgct
ggtagacacggtaataaaggtgttgtctcgatgattcttccaaaagaagatatgccgttc
ttaccagatggtacaccggttcaagttgtgcttagtcctcttggtgttccatcacgtatg
aatatcggtcaggtgcttgaaacatcgcttggttggctcgcaaaattaactaacagatac
tttgcaacgcctgtatttgatggagcaaaagaagatgacatactaccagaactttacaaa
gtaagagaaacacttaacttacatcatggcgatgatccaaataatccatctggaaaagtc
acgctcagagatggtaggacaggtaaagaatttgatttcccagtattagttggttacatg
tacattatgaaacttatccacatagctcgagataaaatacacgcacgagcaacaggtcca
tattcgcttattcaccagcaaccacttggtggtaaagcacaatttggtggtcaaagattt
ggtgaaatggaagtttgggcacttgaagcctacggagcatcttacacactcaacgaaatg
ttaacagtaaagagcgatgacataaagggaagaacagaagtttacaaagctataatgaag
agtaaaaatctcccagaacccgggttacctgagagctttaaagttcttgtcagagaactt
aaaggtttagctttggatgtaagagtatacgatgaacacggaaatgaaatagatattgaa
aaattataa |
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