KEGG   Fusobacterium vincentii 3_1_27: HMPREF0405_00246
Entry
HMPREF0405_00246  CDS       T03625                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
fnt  Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:fnt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fnt02048]
    HMPREF0405_00246
Enzymes [BR:fnt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMPREF0405_00246
Prokaryotic defense system [BR:fnt02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF0405_00246
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD DUF2515 Syntaxin-18_N Rep-A_N
Other DBs
NCBI-ProteinID: EFG33982
LinkDB
Position
1:446009..449047
AA seq 1012 aa
MSSVDYNMLISTLESTVVTEYVKEDMPVYTYQSEADLEREFIKNLQNQGYEYLIIHNEKE
LIVNLKDKLEKLNNIIFSENEWERFFKEKIANKNESIVEKTRTIQEDYIKNFTRDNGTLV
NISLIDKKNIHNNFLQVINQYEEEEGTHNTRYDVSILVNGLPLIHIELKRRGVAIREAFN
QINRYQRDSFWAGSGLFEYVQIFVISNGTNTKYYSNTTRARHIKEMSFNRRKVKKSSNSF
EFTSYWADANNKAITDLVDFTKTFFAKHTILNILTKYCIFDTSDTLLVMRPYQISATERI
LSKIQLANNYKWVGKIDAGGYIWHTTGSGKTLTSFKTAQLASQLDYIDKVLFVVDRKDLD
SQTQKEYDRFSKGSANGNTSTKILKAQLEDRYVNKSKIIITTIQKLGHFIKQNKNHEVFK
KNIVLIFDECHRSQFGELHLAITKTFKNYFMFGFTGTPIFPKNSNGSSKTLFKTTEQTFG
DKLHTYTIVNAINDGNVLPFRIDYINTIKEKENIQDKKVNAIDIEKAMSDPIRIREVVSY
IIEHFEQKTMRNKHYEVKEQRLSGFNSIFAVSSIPVAKKYYLEFKKQLEEKNKNLTIATI
FSYSANEEENTDNLDDESFDTENLDLGSREFLEEAISDYNKKFGTNFDTSSDGFQLYYED
LSKRTKNKEIDILIVVNMFLTGFDATTLNTLWVDKNLRMHGLIQAFSRTNRILNSIKTFG
NIICFRDLQKETDDAIALFGNKEAGGIVLLKTYEEYYNGYEDDKGREKEGYSQLIEELQN
KFPIGEQIIGEQNKKEFIMLFGNILKLKNILSAFDKFAGNEILSEREYQDYQSIYIDLYQ
ERKPKDTDKESINDDIIFEIELIKQVEINIDYILMKVAEYYKSNKKDKEILIDIKKAINS
SIELRSKKELIEGFIDRVNSSKNVTDDFKKFVREEKEKDLEKVIEEEKLKPEETKKFIDN
SLREGTLKTTGTDIDKLLPPVSRFGGGNRAEKKLGVIEKLKVFFDKYLGLTI
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgtcatcagtagattataatatgcttatatcaacacttgaaagtacagtggtaactgaa
tatgtaaaagaagatatgccagtgtatacttatcaaagtgaagcagatttagaaagagaa
tttataaaaaatcttcaaaatcaaggttatgagtatctaattatccataatgaaaaagaa
ttgattgtaaatttaaaagataaattagaaaaattaaataatattattttttctgaaaat
gaatgggagagatttttcaaagaaaaaatagcaaataaaaatgagagtatcgttgaaaag
acaagaactatacaagaggactatataaaaaattttacaagagataatggtactttggta
aatattagcctaatagataaaaagaatatacataataattttcttcaagttataaatcaa
tatgaagaagaagagggaactcataacacaagatatgatgtaagtattttagtaaatggt
ctacctctaattcatatagaattaaaaagaagaggagttgcaataagagaggcttttaac
caaattaatagatatcaaagagatagtttttgggcaggtagtggactttttgaatatgta
caaatatttgtaatttctaatgggactaacactaaatattattctaacacaacaagagca
agacatattaaagaaatgtcttttaatagaagaaaagttaaaaaatctagtaatagtttt
gagtttacttcatattgggctgatgcaaataataaggcaataacagatttagtagatttt
acaaaaactttttttgcaaaacatactattttaaatattttaactaaatactgtatattt
gacacaagcgatactttgcttgttatgcgtccttatcaaatatcagcaacagaaagaatt
ttatctaaaatacaattagctaacaactataaatgggtaggtaaaattgatgctgggggc
tatatttggcatacaactggaagtggaaagactttaacttcatttaaaacagcacaatta
gcttctcagcttgattacatagataaagttttatttgtagttgatagaaaagatttagat
agtcaaacacagaaagaatatgatagattttcaaagggctcagctaatggaaatacctca
acaaaaatattaaaagcacaattagaagatagatatgtaaataaaagcaagataattata
acaacaattcaaaagttaggacattttattaaacaaaataaaaatcacgaagtttttaag
aaaaatattgttcttatttttgatgaatgtcatcgttcacaatttggagaattacacctt
gcaataacaaagacatttaaaaattattttatgtttggtttcacaggaacaccaatattt
ccaaaaaattcaaatggaagctcaaaaactctatttaagacgacagagcaaacttttgga
gataaattacatacatatactattgtcaatgcaataaatgatggaaatgtacttccattt
agaatagactatattaatactattaaggaaaaggaaaatatacaagataaaaaagttaat
gccattgatatagaaaaagctatgtctgacccaatcagaattagagaagttgtttcatat
attatagaacattttgagcaaaaaactatgagaaacaaacactatgaggtaaaggaacaa
agattatcaggttttaactctatatttgcagttagttctattccagtagcaaaaaaatat
tatcttgaatttaaaaagcaactagaagagaaaaataaaaatttaactattgcaacaata
tttagttactcagcaaatgaagaagaaaatactgataatttagatgatgagagttttgac
actgaaaatttagatttaggttctcgtgaatttttagaagaggcaatatctgactataat
aaaaaatttggaacaaactttgatacttcttcagatggttttcaactatattatgaagat
ttgagtaagagaactaaaaacaaggaaatagatattttaatagttgtaaatatgttttta
actggttttgatgcaactactttaaatactctttgggtggataaaaatttgagaatgcat
ggacttattcaagcattttcaaggacaaatagaattttaaattcaataaaaacttttggt
aacataatatgttttagagatttacaaaaagaaacagatgatgcaatagcactttttgga
aataaagaagctgggggaatagtacttttaaaaacttatgaagaatattacaatggctat
gaagatgataaaggtagagaaaaagaaggatatagccaattaatagaagaacttcaaaat
aaatttccaataggtgagcaaataataggagaacaaaataagaaagaattcataatgtta
tttggaaatattttgaaattaaagaatatactgtcagcttttgataaatttgcaggaaat
gaaattttatctgaaagagaatatcaagattatcaaagtatctatatagatttataccaa
gaaagaaaaccgaaggatactgataaagaaagtataaatgatgatattatttttgaaata
gaacttataaaacaagttgaaattaatattgattatattctgatgaaagttgctgaatac
tataaatcaaataaaaaagataaagaaatacttattgatattaaaaaagctataaattca
agtatagaacttcgtagcaagaaagaactgatagaaggctttatagacagagttaattcc
tctaaaaatgttacagatgattttaaaaaatttgtgagagaagaaaaggaaaaagatcta
gaaaaagtgatagaagaagaaaaattaaaaccagaagaaactaagaaattcatagataac
tcattaagagagggtactttaaagacaactggaacagatatagataaattattgccacct
gtatctcgttttggtggaggaaatagagcagaaaaaaaattaggagttattgaaaaatta
aaagtatttttcgataaatatttaggtttgacaatctaa

DBGET integrated database retrieval system