Fusobacterium vincentii 3_1_27: HMPREF0405_00497
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Entry
HMPREF0405_00497 CDS
T03625
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0405_00497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fnt03021
]
HMPREF0405_00497
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_00497
Enzymes [BR:
fnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0405_00497
Transcription machinery [BR:
fnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0405_00497
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0405_00497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
EFG34230
LinkDB
All DBs
Position
1:718064..719044
Genome browser
AA seq
326 aa
AA seq
DB search
MLKIEKQAKAIKITEVKESNYKGQFIVEPLYRGYGNTLGNALRRVLLSSIPGAAIKGMRI
EGVLSEFTVMDGVKEAVTEIILNVKEIVVKAESSGERRMTLSIKGPKVVKAADIVADIGL
EIVNPEQVICTVTTDRTLDMEFIVDTGEGFVVSEEIDKKDWPVDYIAVDAIYTPIRKVSY
EIQDTMFGRMTDFDKLTLNVETDGSIEIRDAISYAVELLKLHLDPFLEIGNKMENLRDDI
EEIIEEPMDIQVVDDKSHDMKIEELDLTVRSFNCLKKAGIEEVSQLASLSLNELLKIKNL
GKKSLDEILEKMKDLGYDLEKNGSPE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagaaaagcaggctaaggcaataaagataacagaagttaaagaaagtaat
tacaaagggcaatttattgtagaacctttatatagaggttatggaaatactttgggaaat
gcacttagaagagttttactttcatctatacctggtgcagcaataaaaggtatgagaatt
gagggagttttaagtgaatttactgttatggatggtgttaaagaagctgttacagaaatt
attttaaatgttaaagaaattgttgtaaaagctgaaagttctggtgaaagaagaatgaca
ctttctataaaaggacctaaggtagtaaaagcagcagatattgttgcagatattgggctt
gaaatagtaaaccctgaacaagtaatctgtactgtaactactgatagaacattagatatg
gaatttatagtagatacaggagaaggatttgttgtatcagaagaaatagataaaaaagat
tggccagtagattatatagctgttgatgctatttacacaccaattagaaaagtttcttat
gaaattcaagatacaatgtttggtagaatgactgactttgataaattgactttaaatgtt
gaaactgatggaagtatagaaataagagatgctatatcatatgctgttgaacttttaaaa
ttacatttagatccatttttagaaatagggaataaaatggaaaatttaagagatgatata
gaagaaataattgaagagccaatggatattcaagttgttgatgataaatctcatgatatg
aaaatagaagaattagatttaacagtaagatcttttaattgcttaaaaaaggctgggata
gaggaagtatctcaattagcaagcttatctttaaatgaattattaaaaattaagaacttg
ggaaaaaaatctcttgatgagattttagaaaagatgaaagatttaggatatgatcttgaa
aaaaatggatctcctgaataa
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