Fusobacterium vincentii 3_1_27: HMPREF0405_00547
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Entry
HMPREF0405_00547 CDS
T03625
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0405_00547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_00547
Enzymes [BR:
fnt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HMPREF0405_00547
DNA repair and recombination proteins [BR:
fnt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0405_00547
Prokaryotic type
HMPREF0405_00547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
EFG34276
LinkDB
All DBs
Position
1:769521..770201
Genome browser
AA seq
226 aa
AA seq
DB search
MSKINNDWKEILEEEFEKEYFVKLKETLEEEYKNYTVYPPKRDILNAFFLTPYSEVKVVL
LGQDPYHQKGQAHGLAFSVNYGIKTPPSLVNMYKELHDDLGLYIPNNGFLEKWAKQGVLL
LNTTLTVRDSQANSHSGLGWQTFTDNVIKSLNEREKPIIFILWGNNAKSKEKFIDTNKHY
ILKGVHPSPLSANRGFFGCKHFSEANRILKNLGEKEIDWQIENKEI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaataatgactggaaagagattttagaagaagagtttgaaaaagaatat
tttgtaaagttaaaggaaactcttgaagaagaatataaaaattatacagtttatcctcca
aaaagggatatactaaatgctttttttctcactccttattcagaagtaaaagttgtactt
ttagggcaagacccttatcatcaaaaaggacaagcacatggacttgcattttctgtaaat
tatggaataaaaactcctccatcacttgtaaatatgtataaagaattacatgatgattta
ggtttgtacattccaaataatggttttcttgaaaaatgggcaaaacaaggagtcttactt
ttaaataccaccttaacagttagagatagtcaggctaattcacattcgggattaggttgg
caaacttttacagacaatgtaataaaatcattaaatgaaagggaaaaaccaataatattt
attttatgggggaataatgctaaatctaaagaaaaatttatagataccaataaacactat
attttaaaaggagttcatcctagcccgctttcagcaaataggggcttctttggttgtaaa
catttcagtgaagcaaatagaattttaaaaaatttaggtgaaaaagagattgattggcaa
atagaaaataaggagatataa
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