Fusobacterium vincentii 3_1_27: HMPREF0405_00594
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Entry
HMPREF0405_00594 CDS
T03625
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnt03016
]
HMPREF0405_00594
Enzymes [BR:
fnt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF0405_00594
Transfer RNA biogenesis [BR:
fnt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0405_00594
Prokaryotic type
HMPREF0405_00594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
EFG34323
LinkDB
All DBs
Position
1:complement(817445..818308)
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AA seq
287 aa
AA seq
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MEGIIVINKPKGITSFDVIRRLKKILKTKKIGHTGTLDPLAIGVMLVCVGKATKLASDLE
AKDKVYIADFDIGYATDTYDIEGKKIAENIIEVSKENLEQSLKKFIGNIKQVPPMYSAIK
IDGNKLYHLARKGIEVERPERDITIEYINLLDFKDNKAKIETKVSKGCYIRSLIYDIGQD
LGTYATMTALQRKQVGEYSLENSYSLEQIEEMTLNNNFKFLKTIEEIFSYDKYNLETEKE
FILYKNGNTVKIKENLENKKYRIYFQDEFIGLANIENNNLLKGYKYY
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggaataatagttataaacaaaccaaaagggataacttcctttgatgttataaga
agacttaaaaaaattttaaaaactaagaaaataggacatactggaactcttgacccattg
gcaataggagttatgcttgtgtgtgttgggaaagctactaaactcgcttcggacttagaa
gctaaggataaagtatatatagcagactttgatataggctatgcaacagatacctatgat
attgaaggaaaaaagatagctgaaaatattattgaagtttcaaaagaaaatttagaacaa
tctttaaaaaaatttataggaaatataaaacaagttcctccaatgtattctgctatcaaa
attgatggaaataaactttatcatttagcaagaaaaggaattgaagttgaaagacctgaa
agagatattactattgaatatattaatcttttagattttaaagataataaagctaaaata
gaaacaaaagtttcaaaaggttgctatataagaagtttaatctatgatataggacaagat
ttaggaacttatgcaaccatgacagcacttcaaagaaaacaggttggagaatattcctta
gaaaattcatatagcttagaacagattgaagaaatgactttaaataataattttaaattc
ttaaaaactattgaagaaattttttcttatgacaaatataatttagaaactgaaaaagaa
tttattttatataaaaacggtaatactgtaaaaataaaagaaaatttagaaaataaaaaa
tatagaatttattttcaagatgaatttataggattagcaaatatagaaaataataatttg
ttaaaaggatataaatattattaa
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