Fusobacterium vincentii 3_1_27: HMPREF0405_00690
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Entry
HMPREF0405_00690 CDS
T03625
Name
(GenBank) UvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0405_00690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_00690
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0405_00690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
HHH_5
GIY-YIG
HHH_2
DUF1048
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
EFG34418
LinkDB
All DBs
Position
1:complement(927884..929578)
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AA seq
564 aa
AA seq
DB search
MGKAKNLKNRVSSYFNRVHENEKTNELVKNIEDIEFFLTNTEIDALLLENNLIKKYSPKY
NILLKDEKTYPFIKISKEDFPSIKIVRTTKALDIKSGEYFGPYPYGAWRLKNILMKLFKI
RDCNRDMKKVSPRPCLKYYMKSCTGPCVYKDIKEEYNKDVENLKQVLRGNTSKLINELTA
LMNKASQDMDFEKSIIYREQIKELKAIASSQIIQYERELDEDIFVFKTILDKAFICVLNM
RDGKILGKSSTSIDLKNKITDNIYEAIFMSYYSKHILPKSLVLDAEYENELSIVVKALTN
EESKKKEFHFPKIKSRRKELLDMAYKNLERDLETYFSKKDTIEKGIKDLHDILELKRFPR
KIECFDISNIQGKDAVASMSVSIEGRAARKEYRKFKIRCKDTPDDFSMMREVIERRYSKL
ADKDFPDVILIDGGLGQINSAGEVLEKLEKIHLSELLSLAKRDEEIYKYGESIPYSLSKD
MEALKIFQRVRDEAHRFGITYHRKLRSKRIISSELDKINGIGEVRRKKLLTKFGSISGIK
KANIEELKEIVPEKVALEIKNKIR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgggaaaggctaagaatctaaaaaatagagtttcttcatattttaatagagttcatgaa
aatgaaaaaactaatgaacttgttaaaaatattgaagatatagaattttttcttactaat
actgaaatagatgccttattgttagaaaataatttaataaaaaaatattctcctaagtat
aatatacttttaaaagatgaaaaaacttatccttttataaagataagtaaagaagatttt
ccaagtataaagattgttagaacaacaaaggctttggatattaaaagtggagaatacttt
ggaccatatccttatggagcttggagattaaaaaacattcttatgaaattatttaaaata
agagattgcaatagagatatgaaaaaagtatctccaagaccttgtttaaaatactatatg
aaaagttgtactggaccttgtgtatataaggatataaaggaagaatataataaagatgtt
gaaaatttaaaacaggttttaagaggtaacacaagtaaattaataaatgaattgacagca
ttgatgaataaagcctctcaggatatggattttgaaaaatcaataatatatagagaacaa
ataaaagagttaaaagctattgcaagttcacaaataattcaatatgaaagggaacttgat
gaagatatatttgtatttaagactattttagataaagcttttatctgtgtcttaaatatg
agagatggaaaaattttaggtaaatcttccacttcaatagatttaaaaaataaaattact
gataatatctatgaagcaatttttatgtcttactattcaaaacacatattacctaaaagt
ttagttttagatgctgaatatgaaaatgaattatcaattgttgttaaagccttaactaat
gaagaaagtaagaaaaaagaatttcattttcctaaaataaaaagtagacgaaaagaatta
cttgatatggcatataaaaatttagaaagagatttagaaacttatttttctaaaaaagat
actattgaaaagggaattaaagatttacatgatattttagaattaaaaagatttcctaga
aaaattgaatgttttgatatatctaatattcaaggtaaggatgctgttgcttctatgagt
gtttctattgaaggaagagcagcaagaaaagaatataggaaatttaaaattagatgtaag
gatacaccagatgacttttcaatgatgagagaagttattgaaagaagatattctaaacta
gcagataaagattttccagatgttatattgattgatggaggtttaggacaaattaattca
gctggtgaagtcttagaaaaattagaaaaaattcatttaagtgaacttttaagtttagca
aaaagagatgaagaaatttataaatatggagaatctattccatatagtttaagtaaagat
atggaagctttaaaaatatttcaaagggttagagatgaagcacatagatttggtataaca
tatcatagaaaacttagaagtaagagaataatttcatcagaacttgataaaataaatgga
ataggagaagtaagaagaaaaaaattacttacaaaatttggttctatttctggtattaaa
aaagcaaacattgaagaattgaaggaaatagttccagaaaaagttgcattagaaataaaa
aataaaattagataa
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