Fusobacterium vincentii 3_1_27: HMPREF0405_00691
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Entry
HMPREF0405_00691 CDS
T03625
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnt03019
]
HMPREF0405_00691
Messenger RNA biogenesis [BR:
fnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HMPREF0405_00691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_18
Zeta_toxin
ABC_tran
nSTAND3
AAA_14
AAA_24
AAA_30
AAA_33
cobW
SLFN-g3_helicase
AAA_28
T2SSE
Ins_allergen_rp
AAA_23
Motif
Other DBs
NCBI-ProteinID:
EFG34419
LinkDB
All DBs
Position
1:complement(929641..930507)
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AA seq
288 aa
AA seq
DB search
MKTKHIIIVTGLSGAGKTTALNILEDMNYYTIDNLPLGLEKSLLDTEIEKLAVGIDIRTF
KNTKDFFKFINYIKETGVKMDIIFIEAHEAIILGRYTLTRRAHPLKEVTLLRSILKEKKI
LFPIREIADLVIDTTDTKAVELEKRFKKFILAKDEDNIDINIHIQSFGYKYGIPTDSDLM
FDVRFIPNPYYIEKLKELNGFDEEVKEYVLSQKESGKFYSKLLPLLEFLIPQYIKEGKKH
LTISIGCSGGQHRSVTFVNKLAEDLKNSKVLKHINIYVSHREKELGHW
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactaaacatatcattatcgtaactggtttgagtggtgcaggaaaaacaactgct
ttaaatattttggaagatatgaactattacactattgataatcttcctttggggttagaa
aaatctttacttgatactgaaattgaaaaattggcagtaggtatagatattaggacattt
aaaaacacaaaagatttttttaaatttataaactatatcaaagaaactggtgtaaaaatg
gatatcatctttatagaagcacatgaggcaatcattttaggaagatatacattaactcgt
agagcacatcctttaaaggaagtaacattattaagaagcatattaaaagagaaaaaaata
ttatttcctataagagaaatagcagatttagtaatagatacaacagatacaaaagctgtt
gagctagaaaaaagatttaaaaaatttatattagcaaaagatgaagataatatagatata
aatatccacatacaatcttttggatataaatatggtattcctactgatagtgatttaatg
tttgatgtaagatttattcctaacccttattatatagaaaaattaaaagagttaaatggt
tttgatgaagaagtcaaagaatatgtcttatcacaaaaagaaagtggaaaattttattct
aaattgttgccacttcttgaatttttaattccacaatatataaaagaaggtaaaaaacat
ttaacaatttcaataggttgtagtggtggacaacatagatcagtaacctttgttaataaa
ctagcagaggatttaaaaaatagtaaagtattaaaacatataaatatttatgtaagtcat
agggagaaagaacttggacattggtaa
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