Fusobacterium vincentii 3_1_27: HMPREF0405_00709
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Entry
HMPREF0405_00709 CDS
T03625
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnt03032
]
HMPREF0405_00709
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_00709
Enzymes [BR:
fnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMPREF0405_00709
DNA replication proteins [BR:
fnt03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0405_00709
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0405_00709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_C_rpt
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
EFG34436
LinkDB
All DBs
Position
1:complement(944892..947156)
Genome browser
AA seq
754 aa
AA seq
DB search
MPKKSEKNKLVIVESPAKAKTIEKILGKSYKVISSFGHIIDLPKTKIGVDVNNDFKPSYH
TIKGKGEVIKQLKEASKKADKIYLASDPDREGESIAWHIANTLKLDHNEKNRIEFHEITE
RAIKDAVKNPRKINISRVNSQQARRILDRLVGYEISPFLWKLISPNTSAGRVQSVALKII
CELEDKIKAFVPEKYWDVKGIFNGKYNLNLYKIDNEKIDKLKDEKLLDRVKKDLKKKYEV
ISSKVSKKIKNPPLPLKTSTLQQLASSYLGFSASKTMTVAQKLYEGISIKGEHKGLITYM
RTDSTRISEEAKEMARNYIIKEYGKEYLGSASPKTKKESKNVQDAHEGVRPTDINLTPQN
VMQYLDKDQFKLYNLIWQRFLISQLAAMKYEQFEYILEKDKIQYRGSINKIIFDGYYKVF
KEDEDLPIGDFPEIKEGDKFTLDKLDIKEDYTKPPARLTESSLVKTLEAEGIGRPSTYAS
IIDTLKKREYVELQNKSFVPTEIGYEVKTQLDKFFPNIMNIKFTAKLEDELDEVDSGDKN
WIDLLKAFYTELQKYEEKCKSVVEEELERLVVSDVLDKNEKPMIMKIGRFGRYLASQDTE
SKENISLKGIDISLEDIKKGKIFVKKQIQELSKKKEGQKTDIILDNGSRLLLKYGRFGVY
LESDNYKEDNIRKTIPKEIKTKIDNNTIKKENDILCLKDMFDKIEKEEAEILKKAGKCEK
CGRPFKIKNGRWGKFLACTGYPECKNIKKISKDK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaaaaagtcagaaaaaaataaattagtaatagtggaatcaccagctaaggctaaa
acaatagaaaaaattttaggaaagtcatataaagtaatttcttcttttggacatataatt
gacttgcctaaaactaaaataggtgtagatgtaaataatgattttaaaccatcttatcat
actataaaaggtaaaggagaagttataaagcaattaaaagaagcttctaaaaaggctgat
aagatatatcttgcttctgaccctgatagagagggagaatcaatagcttggcatatagct
aatacattaaaacttgaccacaatgaaaaaaatagaatagaatttcatgaaattactgaa
agagcaataaaagatgctgttaaaaatcctagaaaaattaatatatcaagagttaactct
caacaagctagaagaattttggatagacttgtaggctatgaaataagtccattcttatgg
aaacttatttctccaaatacaagtgcaggtagagttcaatctgttgctttaaaaataata
tgtgagttagaagataaaatcaaagcttttgttccagaaaaatattgggatgtaaaagga
atttttaatggaaaatataatttaaatctatataaaattgataatgagaaaatagataaa
ctaaaagatgaaaaattacttgatagagtgaagaaagatttaaaaaagaaatatgaagtt
atttcatctaaggtgtcaaagaaaattaaaaatccacctttaccattgaaaacaagtact
ttacaacaattagcttcatcatatttaggcttttctgcaagtaagactatgacagttgca
caaaaattatatgaaggcattagtattaaaggagaacataaaggacttattacttatatg
agaactgactctacaagaatttcagaagaagcaaaagaaatggcaagaaactatataatt
aaagagtatggtaaagagtatttaggttcagcaagccctaaaactaaaaaagaaagtaaa
aatgttcaagatgcacacgaaggagttagacccactgatattaatttaacacctcaaaat
gtgatgcaatatttagataaagaccagttcaagctatataatttaatatggcaaagattt
ttaatatctcaactcgcagctatgaagtatgagcaatttgaatatattttagaaaaagat
aaaatccaatatagaggaagtataaataaaataatttttgatggttattataaagtattt
aaagaagatgaagatttgccaataggggattttcctgaaataaaagaaggggataaattt
actcttgataaattagatattaaagaagattatactaaacctcctgcaaggcttactgaa
tcatcattagtaaaaactcttgaagcagaaggtattggtagaccctcaacttacgcaagt
ataatagatactttaaaaaagagagaatatgtagaactacaaaataaaagctttgttccg
acagaaataggttatgaagttaaaactcaacttgataaattctttcctaatattatgaat
ataaaattcactgctaaattagaagatgaactagatgaagttgatagtggagataaaaat
tggatagatttattaaaagctttttacactgaattacaaaaatatgaagaaaaatgtaaa
tctgttgtagaagaagaattggaaagattagttgtgtctgatgttcttgataaaaatgaa
aaacctatgataatgaaaattggtagatttggaagatatcttgcttcacaagacactgaa
agtaaggaaaatatttcattaaaaggtatagatatttctcttgaagatataaaaaaaggc
aaaatatttgttaaaaaacaaattcaagaattgagtaagaaaaaagaaggacaaaaaact
gatattattttagataatggttcaagacttttattaaaatatggtagatttggagtatat
ttagaaagtgataattataaagaagacaatattagaaaaactattccaaaagaaataaaa
actaaaattgataataatacaataaaaaaagaaaatgatattttatgtttaaaggatatg
tttgacaaaattgaaaaagaagaagctgagatattgaagaaagctggaaagtgtgaaaaa
tgtggtagaccatttaaaattaaaaatggaagatggggtaaatttttagcttgtactggc
tatcctgaatgtaaaaatattaaaaaaataagtaaagataaataa
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