Fusobacterium vincentii 3_1_27: HMPREF0405_01076
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Entry
HMPREF0405_01076 CDS
T03625
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF0405_01076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_01076
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HMPREF0405_01076
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_14
nSTAND_NTPase5
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
EFG34797
LinkDB
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Position
1:complement(1346383..1349016)
Genome browser
AA seq
877 aa
AA seq
DB search
MSADTPLMQQYKKIKKDYQNEILMFRLGDFYEMFFEDAKIASKELGLTLTKRNKEKGQDV
PLAGVPYHSVASYIAKLVEKGYSIAICDQVEDPKSATGIVKREVTRVITPGTIIDVDFLD
KNNNNYIACVKINTTESIAAIAYADITTGEFSVFEIKGKNFFEKALAEMNKIQASEILLD
EKTYSEYIEIFKEKISFSGVKFTEVSNVKKAENFITSYFNIISIEVFSLKSKDLAISTSA
NLLHYIDELQKGNELPFSKIEYRNIDNIMELNISTQNNLNLVPKRNEEARGTLLGVLDNC
VTSVGSRELKKIIKNPFLDIEKIKQRQFYVDYFYNDVLLRENVREHLKDIYDVERIAGKI
IYGTENGKDLLSLKDSIRKSLETYRLLKEHQEIKNLLDIDVKTLLDIYNKIELIISVEAP
FSVREGGIIKDGYNLELDELRKISKLGKDFILEIEQRERERTGIKGLKIKYNKVFGYFIE
VTKANEHLVPEDYIRKQTLVNSERYIVPDLKEYEEKVITAKSKIEALEYELFKQLTSEIK
EHIDSLYKLANRIANLDIVSNFSHIATKNSYVKPEISEEDILEIKGGRHPIVETLIASGT
YVKNDIVLDDKNNLIILTGPNMSGKSTYMKQVALNIIMAHIGSYVAADYAKIPIVDKIFT
RVGASDNLLTGQSTFMLEMTEVASILNSATKKSFIVLDEIGRGTSTYDGISIATAITEYI
HNVIGAKTIFATHYHELTELEKELERAINFRVEVKEDGKNVVFLREIVKGGADKSYGIEV
ARLSGVPKEVLNRSRKILKKLETRKNLIENKIKAEQMMLFGNGFEEDFEEEETEILSENE
NKVLELLKNMDLNSLSPLESLLKLNELKKILIGGTDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagacacacccttaatgcaacaatataaaaaaattaaaaaagattatcaaaat
gaaatactaatgtttagattgggagatttctatgaaatgttttttgaagatgctaaaata
gcttcaaaagaattaggacttactcttacaaaaagaaataaagaaaaaggacaagatgtt
cccttagcaggagttccatatcattcagtggcatcatatatagcaaaattagttgaaaaa
ggttatagtattgctatctgtgatcaagtggaagatcctaaatctgcaacagggattgta
aaaagagaggtaacaagagttataactcctggaactataatagatgtagatttcttagat
aaaaataataataactatattgcttgtgtaaaaataaatacaacagaaagtatagctgca
atagcttatgcagatataacaacaggagaattttcagtttttgaaataaaaggaaaaaat
ttctttgaaaaagcattagctgaaatgaataagatacaagcaagtgaaattttgctagat
gaaaaaacatattcagaatatatagaaatttttaaagaaaaaatatcattttcaggagtc
aaatttacagaagtttctaatgtaaaaaaagctgaaaattttataacttcatattttaat
attatatctattgaagtattttctttaaaatcaaaagatttagctatctcaacatcagca
aatcttttacactatattgatgaattacaaaaaggaaatgaattaccttttagcaagata
gaatatagaaatattgacaatataatggaattaaatataagtacacaaaataatctaaat
ctagtacctaaaagaaatgaagaagctagaggaactctattaggagttttagataattgt
gtaacttctgttggtagtagagaattaaaaaaaattataaaaaatccatttttagatata
gaaaagataaaacaaagacaattctatgtggactatttctataatgatgtacttttaaga
gaaaatgtaagagaacatttaaaagatatttatgatgttgaaagaatagcaggaaaaata
atctatggtacagaaaatggaaaggatctgctatcattaaaggattctataagaaaatca
ttggaaacttatagacttttaaaagaacatcaagagataaaaaatcttttagatatagat
gttaaaactctattagatatatataataaaatagaattaattattagtgttgaagcacct
ttttcagttagggaaggtggaattataaaagatggatataatttagaattagatgagctt
agaaaaatatctaagctaggaaaagattttatacttgaaatagaacaaagagaaagagaa
agaacaggtataaaaggactaaaaataaaatacaataaggtctttgggtattttatagaa
gttactaaggcaaatgaacatttagttccagaggactatataagaaaacaaactcttgta
aacagtgaaagatatatagttcctgatttaaaagaatatgaagaaaaagttattacagct
aaaagtaaaattgaagccttagagtatgaattatttaagcaacttacttctgaaattaaa
gaacatatagatagtttatataaattagcaaatagaatagcaaatttagatatagtttca
aatttttcgcatatagcaacaaaaaattcttatgttaaaccagaaataagtgaagaagat
attttagaaattaaaggaggtagacacccaatagttgaaactttaattgctagtggaact
tatgttaaaaatgatattgttttagatgataaaaataatctaatcattttaacaggtcct
aatatgtctggaaaatctacttatatgaagcaagtggctttaaatataataatggcacat
ataggtagttatgtagcagcagattatgctaaaattcctattgtggataaaatttttaca
agagttggagcaagtgataatttacttacaggacaatctacctttatgttagaaatgacg
gaagtagctagtattttaaatagtgcaacaaaaaagtcttttatagttttagatgaaatt
ggtagaggaacttcaacttatgatggaatctcaatagcaactgctatcacagagtatatt
cataatgttataggagctaaaactatatttgcaactcactatcatgaacttacagagctt
gaaaaagagcttgaaagagcaataaattttagagtagaagtaaaagaagatggtaaaaat
gttgtatttttaagagaaatagtaaaaggtggagcagataaatcttatggtattgaggtt
gcaagattatctggtgttcctaaggaagttttaaatcgttcaagaaagattttaaaaaaa
ttagaaactagaaaaaatttaatagaaaataaaataaaagctgaacaaatgatgcttttt
ggaaatggatttgaagaagattttgaggaagaagaaacagaaatattatctgaaaatgaa
aataaggtattggaattattgaaaaatatggacttaaattctctaagtcctttggaaagt
ttactaaaattaaatgaattgaaaaagattcttatcggaggaactgatgagtaa
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