Fusobacterium vincentii 3_1_27: HMPREF0405_01096
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Entry
HMPREF0405_01096 CDS
T03625
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0405_01096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnt03019
]
HMPREF0405_01096
03110 Chaperones and folding catalysts [BR:
fnt03110
]
HMPREF0405_01096
03029 Mitochondrial biogenesis [BR:
fnt03029
]
HMPREF0405_01096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fnt04147
]
HMPREF0405_01096
Enzymes [BR:
fnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF0405_01096
Messenger RNA biogenesis [BR:
fnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0405_01096
Chaperones and folding catalysts [BR:
fnt03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF0405_01096
Mitochondrial biogenesis [BR:
fnt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF0405_01096
Exosome [BR:
fnt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0405_01096
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0405_01096
Exosomal proteins of breast cancer cells
HMPREF0405_01096
Exosomal proteins of colorectal cancer cells
HMPREF0405_01096
Exosomal proteins of bladder cancer cells
HMPREF0405_01096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
EFG34817
LinkDB
All DBs
Position
1:1366685..1368304
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIINFNDEARKKLEIGVNTLADAVKITLGPRGRNVVLEKSYGAPLITNDGVTIAKEIE
LEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPVFLKKGIE
LAAKEAIEVLKDKAKKIESNEEISQVASISAGDEEIGKLIAQAMAKVGETGVITVEEAKS
LETTLETVEGMQFDKGYVSPYMVTDSERMTAELDNPLILLTDKKISSMKELLPLLEQTVQ
MSKPVLIVADDIEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAILEDIAILTGGEVIS
EEKGMKLEEATIQQLGKAKTVKVTKDLTVIVDGGGKQENISARVNLIKAQIEETTSDYDK
EKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILLDI
IESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDAKNE
KYVNMIESGIIDPAKVTRAAIQNSTSVASLLLTTEVVIANKKEEEKTPMGAGGMMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattataaattttaatgatgaagctagaaaaaaattagaaattggggttaat
acccttgcagatgcagtaaaaattacattaggaccaagaggtagaaatgtagttcttgaa
aagtcttatggagcacctttaattactaatgatggtgttacaatagcaaaagaaattgaa
ttggaagatccatttgaaaatatgggtgcagcattagttaaagaagttgctattaaatca
aatgatgttgcaggagatggaacaacaacagctacaatcttagcacaagctattgttaaa
gaaggattaaaaatgttgagtgctggtgcaaatccagttttcttaaagaaagggattgaa
cttgctgcaaaagaagctattgaagttttaaaagataaagctaaaaaaattgaatctaat
gaagaaatttcacaagttgcatcaatttcagctggtgatgaagaaataggtaaattaatt
gctcaagctatggcaaaagttggtgaaacaggagtaataactgttgaagaagctaaatct
ttagaaacaactttggaaactgttgaaggaatgcaatttgataaagggtatgtttctcca
tatatggttacagattctgaaagaatgacagcagaacttgataatcctttaatcttattg
acagataaaaaaatttcttcaatgaaagaattattacctttacttgaacaaacagtacaa
atgtctaagccagttttaattgtggctgatgatattgaaggagaagctctaacaactctt
gttataaataaattaagaggaactttaaatgttgttgctgttaaagcccctgcttttgga
gatagaagaaaggctatacttgaagatattgctatcctaactggtggagaagttatatca
gaagaaaaaggaatgaaattagaagaggctactattcaacaattaggaaaagctaaaacg
gttaaagttacaaaagatttaactgtaattgttgatggtggaggaaaacaagaaaatata
tctgcaagagttaatttaataaaagctcaaatagaagaaactacttctgattatgataaa
gaaaaattacaagaaagacttgcaaaattatctggtggggttgctgtaataaaagttgga
gctgccacagaagttgaaatgaaagataaaaaattaagaatagaagatgctttaaatgca
acaagggctgctgttgaagaaggaatagttgctggtggaggaactatcttacttgatatc
attgaatcaatgaaagactttaatgaaactggtgaaatagctatgggtattgaaatagtt
aaaagagctttggaagcacctataaaacaaatagctgaaaactgtggattaaatggtgga
gtagttttagaaaaagttagaatgtcacctaaaggttttggttttgatgctaaaaatgaa
aaatatgttaatatgatagaatctggaatcattgacccagcgaaagttacaagagctgct
atacaaaattctacttctgttgcatctttacttttaacaacagaagttgtcattgcaaat
aagaaggaagaagaaaaaactccaatgggagctggtggaatgatgccaggaatgatgtaa
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