Fusobacterium vincentii 3_1_27: HMPREF0405_01136
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Entry
HMPREF0405_01136 CDS
T03625
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03420
Nucleotide excision repair
fnt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0405_01136
03430 Mismatch repair
HMPREF0405_01136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_01136
Enzymes [BR:
fnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0405_01136
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0405_01136
MMR (mismatch excision repair)
Other MMR factors
HMPREF0405_01136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
EFG34856
LinkDB
All DBs
Position
1:complement(1410795..1413008)
Genome browser
AA seq
737 aa
AA seq
DB search
MNLNLLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVT
FTNKAAKEMRERVEELVGDIAKACTISTFHSFGMRLLRMYAKEVEYNSNFTIYDTDDQKR
IVKAILKGQNISLNGVKLTERDIVSMISKIKEEIKTLDEYSIMNKQIVEVYDKYNRVLLE
SNAMDFSDILLNTYKLLQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLC
VVGDENQSIYGFRGANILNILNFETNYNNAKIIKLEENYRSTTTILDAANELIKNNKSSK
DKKLWTQNGKGDLIKVLACDNARDEVSRIIEIIKENHQNGIAYRDMTILYRTNAQSRVFE
EGLLRYSIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGVE
KIIAYARENNLNLLEALSHIKEISGLTAVGKEKLLEMYDIIKELKDLSYTEIASYIVQTL
IDKIKYIDYIKENYDDAEARIENIDEFKNSILELENIVGELRLNEYLENVSLISATDDLE
EKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGSRAMFDEKEMEEERRLCYVALTRAEK
KLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIDVKKERLYFEDDYSNEIKAYDNSRK
FEKKKTEINTKNTIKFDDNTKKIIDNLGFKVGDKVKHKKFGLGVIKNIDAKKIYVQYVDG
TKEMAIVLADKLLTKFE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaacttattagaaaagttaaatgataagcaaagagaagcagcctctcaaatt
gatggctctattttaattttagcaggagctggttctggaaaaacaagaacaattacatat
agaatagcacatatgatagaaaatgttggaattagcccttatagtattctagctgttaca
tttacaaataaggcagcaaaagaaatgagagaaagagttgaagagcttgttggagatatt
gctaaagcttgtacaatttcgactttccattcatttggtatgagacttttaagaatgtat
gcaaaagaagtagaatacaattcaaatttcactatatatgacacagatgaccaaaaaaga
atagtaaaagctattttaaagggacaaaatataagtttaaatggagttaaactgacagaa
agagatattgtttctatgatttcaaaaataaaagaagaaataaaaactcttgatgaatat
tctataatgaataaacaaatagttgaagtatatgataaatataatagagtattattagaa
agcaatgctatggatttttcagatatacttttaaatacatataaattattacaaaaacct
gaaatacttgaaaaagttcaaaataagtataaatatataatgatagatgaatatcaagac
acaaataatttacaatataaaataatagatttaatagcaagaaaatcatctaatctatgt
gtagttggagatgaaaaccaaagtatttatggatttagaggagctaacattttaaatata
cttaactttgaaactaattataataatgctaaaattataaaattagaagaaaattataga
tctactactacaatattagatgcagcaaatgagttgataaaaaataataaatcatcaaaa
gataaaaaattatggacacaaaatggaaaaggagatttaataaaagttttagcttgtgat
aatgcaagagatgaagttagcaggataattgaaattataaaagaaaatcatcaaaatggt
atagcttacagagatatgactatactgtatagaactaatgcacaatcaagagtttttgaa
gagggacttttaagatatagtatccctcataaagtttttggaggtataagtttctattca
agagcagaaattaaagatataattgcatatttatctattattgttaatccacaagatgaa
ttaaatttacaaagaataatcaatgttcctaaaagaaaagtaggagaaaaaggagtagag
aaaataattgcttatgccagagaaaataacttaaatttacttgaagctctttctcatata
aaagagatttccggactaactgctgttggaaaagaaaaacttttagaaatgtatgatata
ataaaagaactaaaagatttatcttatacagaaatagcttcatatatagtacaaacttta
atagataaaataaaatatatagactatatcaaagaaaattatgatgatgcagaagcaaga
atagaaaatatagatgaatttaaaaattctatcttagagcttgaaaatattgtaggagaa
ttgagattaaatgaatatttagaaaatgtatctttgataagtgcaacagatgatttagaa
gaaaaaagtgattatgtaaaattgatgactattcataactcaaaaggtttggaatttcca
atagttttcttagttggctttgaaaatgaaatctttccagggtcaagggcaatgtttgac
gaaaaagaaatggaagaagaaagaagactttgttatgttgctttaacaagagcagaaaag
aaactatatttatctcatgcaactataagatttgtctatgggcaagatagattatcaaca
ccatcagtatttttaaaggaaataccagaaaaattattagatattgatgttaaaaaagaa
agattatattttgaagatgattattctaatgaaataaaagcctatgataatagcagaaaa
tttgaaaagaaaaagactgaaataaatacaaaaaatactataaaatttgatgataatact
aagaaaattattgataatttaggttttaaagtgggagataaagtaaaacataaaaagttt
ggtttaggtgtaattaaaaatatagatgctaaaaaaatatacgtacaatatgttgatgga
acaaaagaaatggctattgtattagcagataaacttttaactaaatttgaatag
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