Fusobacterium vincentii 3_1_27: HMPREF0405_01232
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Entry
HMPREF0405_01232 CDS
T03625
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnt03016
]
HMPREF0405_01232
Enzymes [BR:
fnt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HMPREF0405_01232
Transfer RNA biogenesis [BR:
fnt03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HMPREF0405_01232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Aegyptin_C
Motif
Other DBs
NCBI-ProteinID:
EFG34951
LinkDB
All DBs
Position
1:complement(1520901..1522208)
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AA seq
435 aa
AA seq
DB search
MKKASIITYGCQMNVNESAKIKKIFQNLGYDVTEEIDNADAVFLNTCTVREGAATQIFGK
LGELKALKEKRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIEKIENNES
THEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYVRGRERSVPLEEIVK
DVEQYVKKGAKEIVLLGQNVNSYGKDFKNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFT
DDVIDVIAKNDKISKCLHLPLQSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTAD
IIVGFPGETEEDFLDTIDVVQKVSFDNSYMFMYSIRKGTKAATMDNQIEEAVKKERLQRL
MEVQNKCSFEESSKYKDRIVKVLVEGSSKKNKEVLSGRTSTNKVVLFKGNLGLKGQFVNV
KINECKTWTLYGEIV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaggcatcaatcatcacttatggatgtcaaatgaatgtaaatgaaagtgcaaaa
ataaagaaaatttttcaaaatttaggatatgatgttacagaagaaatagataatgcagat
gcagtctttttaaatacttgtacagtaagagaaggtgcagcaactcaaatatttggaaaa
ttaggagaattaaaagcacttaaagaaaaaagaggaactataataggggttacaggttgt
tttgcacaggagcaaggagaagaacttgtaaaaaaatttccaataatagatatagttatg
ggaaaccaaaatatagggagaataccccaagcaatagaaaaaatagaaaataatgaaagc
actcatgaagtatatacagataatgaagatgaattaccaccaaggctagatgctgaattt
ggttcagatcaaacagcctctatttcaatcacttatggttgtaataatttttgcactttt
tgtatagttccctatgttagaggaagagaaaggtctgttccacttgaagaaatagtcaaa
gatgtggaacaatatgtaaaaaaaggtgcaaaggaaatagttttactagggcaaaatgtt
aattcatatggaaaagattttaaaaatggagataattttgcaaaacttttagatgaaatt
tgtaaagttgagggagattatatagtgagatttgtatctccacaccctagggattttaca
gatgatgtcatagatgttattgcaaaaaatgataaaatatcaaaatgcttacatctacct
ttacaatcaggctcatctcaaatattaagaaagatgggaagaggttacactaaggaaaaa
tatttagccttagttgataaaataaaatcaaaaattcctggtgtggcactaacagcagat
attatagttgggttcccaggagaaacagaagaggactttttagacactattgatgttgta
caaaaagttagctttgataattcatatatgtttatgtattctataagaaagggaacaaaa
gcggcaactatggataatcaaatagaagaagctgtaaaaaaagaaagacttcaaagattg
atggaagttcaaaataaatgttcttttgaagaaagtagtaaatataaagatagaattgtc
aaagttttagtggaaggttctagcaagaagaataaggaagttttatctggaaggacttca
acaaataaggttgtactttttaaaggaaatttaggtttaaaaggacaatttgtaaatgta
aaaattaatgaatgtaaaacttggacattatatggagaaatagtttag
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