Fusobacterium vincentii 3_1_27: HMPREF0405_01430
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Entry
HMPREF0405_01430 CDS
T03625
Name
(GenBank) rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnt03019
]
HMPREF0405_01430
03009 Ribosome biogenesis [BR:
fnt03009
]
HMPREF0405_01430
Messenger RNA biogenesis [BR:
fnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0405_01430
Ribosome biogenesis [BR:
fnt03009
]
Prokaryotic type
rRNA processing factors
HMPREF0405_01430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Sororin_C
DUF5351
Motif
Other DBs
NCBI-ProteinID:
EFG35148
LinkDB
All DBs
Position
2:complement(15407..16783)
Genome browser
AA seq
458 aa
AA seq
DB search
MKKYLILSKSVYETKLVLLEDNKLDEMYIERNNQKEISGNIYKGKVVDILNNGEIIFVDI
GLEKNAFLSFENKKNIPKFNIDDKLIVQAETEPRDEKGAKLTLDYSINGENLVLLLKSKN
LSISKKIKDIEEVNRLKNIFLSIDNGLILRTNSKGKSEESLLEEYRKLEDINNQINKDFE
KINIGVLYDVNSISKKAVILLDDTVEEFIIDDKNIFEEIKVLLEEIGKKDLIKKLRKYFK
DEEIFEYYNINSQIERALDRKVYLDSGAYIIIEKTEALISIDVNTGQNTGNKTSQELIFQ
TNLEATKEIARQIKLRNLAGIIIVDFIDMKKFSDRKRILEEFKKYLNEDRTEINSVEYTN
LGLIQFTRKRQGKELAFYYREKCLYCEGTGYFLSKDRVILNLLEDLNSQIKSQDIKKIII
RTKKDIIKELNKYINNNKIECIEDNNFYKIGYKMELYN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatctgattttatctaaaagtgtatatgaaacaaaacttgttttacttgaa
gataataaattagatgaaatgtatatagagagaaataatcaaaaagaaattagtgggaat
atttataaaggtaaggttgtagatattttaaataatggagaaattatttttgtagatata
ggtttagaaaaaaatgctttcttatcatttgaaaataaaaaaaatattcctaaatttaat
atagatgataaattaattgttcaggcagaaactgagccaagagatgaaaaaggggcaaaa
ctaactcttgattattcaataaatggagaaaatttagtattattactaaagtcaaaaaat
ctttctatatctaagaaaataaaagatattgaagaagttaatagattaaaaaatatattt
ttgagtatagataatggcttaatacttagaactaattctaagggaaaatcagaagaaagt
ttattagaagaatatagaaaattagaagatatcaataatcaaataaataaagattttgaa
aagataaatataggcgtactttatgatgttaatagcatatcaaaaaaagcagtaatttta
ttagacgatacagtagaagaatttattattgatgataagaatatttttgaagaaataaaa
gttttattggaagaaataggaaaaaaagatttaataaaaaaattaagaaaatattttaaa
gatgaagaaatttttgaatattataatataaactcacagattgaaagagctttggataga
aaggtttatttagatagtggagcatatattataattgaaaaaacagaggctttaattagt
atagatgtaaatacaggacaaaatactggaaataaaacttcacaagaacttatttttcaa
acaaatttagaggctacaaaagagatagcaagacaaataaaattaagaaacttagctgga
ataattattgtagatttcatagatatgaaaaaattttctgatagaaaaagaattttagaa
gaatttaaaaaatatttaaatgaggacaggactgaaataaattcagttgaatatacaaat
cttggtttaatacaatttacaagaaaaaggcagggaaaagaattagcattttattataga
gaaaaatgcttatattgtgagggaacaggatattttttgtcaaaagatagagtaatttta
aatcttttagaggatttaaacagtcaaataaaaagtcaagatataaaaaagattataatt
agaacaaaaaaagatataataaaagagcttaataagtacataaacaataataaaattgaa
tgtatagaagataataacttttataagataggttataagatggaattatataattaa
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