Fusobacterium vincentii 3_1_27: HMPREF0405_01433
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Entry
HMPREF0405_01433 CDS
T03625
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_01433
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0405_01433
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
Lon_C
ChlI
DUF7125
DnaB_C
AAA_14
AAA_24
nSTAND3
GvpD_P-loop
AAA
AAA_22
AAA_16
NTPase_1
ABC_tran
nSTAND_NTPase5
SLFN-g3_helicase
ATPase_2
DUF7129
AAA_19
DUF4310
NB-ARC
RsgA_GTPase
AAA_29
CobU
NACHT
YhjD
RecA_N
KdpD
AAA_30
VapE-like_dom
DAP3
MeaB
Zeta_toxin
DZR
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
EFG35151
LinkDB
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Position
2:complement(12243..13625)
Genome browser
AA seq
460 aa
AA seq
DB search
MAKGSVYYCSECGYKSAKWAGKCPQCGAWSSFEEVDELPKDVKKATSSISVANRNSDIKV
YEFKDVEYTSEDRYKTKYEEFDRLLGGGLLKGEVVLVTGNPGIGKSTLLLQVANSYKNYG
DILYISGEESPAQIKNRGERLKISGESIYIMAEMDILNIYEYVVSKKPKVVIVDSIQTLY
NSSMDSISGTPTQIRECTLKIIEIAKKYNISFFIVGHITKDGKVAGPKLLEHMVDAVFNF
EGDEGLYYRILRSVKNRFGSTNEIAVFSMEENGMKEIKNSSEYFLSEREEKNIGSMVVPI
LEGTKVFLLEVQSLITDSGIGIPKRVVQGYDRNRIQILTAIAEKKLYVPLGMKDLFVNVP
GGLAIEDPAADLAVLMSILSVHKGFAISQKIAAIGELGLRGEIRKVFFLERRLKELEKLG
FTGVYVPESNRKELEKKKFKLKIIYLKNLDELLERMNKND
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctaagggaagtgtatattattgttcagagtgtggatataaaagtgcaaaatgggct
ggaaaatgtccacagtgtggagcttggtcaagctttgaagaggttgatgaattaccaaaa
gatgtaaagaaagcaacatcttcaatttcagttgccaacagaaactctgatataaaagtt
tatgaatttaaagatgtagagtacacaagtgaagatagatataaaacgaagtatgaagaa
tttgatagattacttggaggaggacttttaaaaggggaagtggttttagtaacaggtaat
ccaggaataggaaagtctactttacttttacaagttgctaattcatataaaaactatgga
gatattttatatatctctggtgaagaatctcctgcacaaataaaaaataggggagaaaga
ttaaaaatatctggtgaaagtatatatattatggctgaaatggatattttaaatatatat
gaatatgttgtaagtaaaaaaccaaaagttgttattgtagattctatacaaacattgtat
aattctagtatggattccatatctggtacaccgacccaaattagagaatgtactttaaaa
attattgagatagctaagaaatataatatttcattttttatagttggacatatcacaaaa
gatggaaaagttgcaggaccaaaacttcttgaacatatggttgatgctgtatttaatttt
gaaggtgatgagggactttattataggatactcagaagtgtgaaaaatagatttggttca
actaatgaaattgcagtatttagtatggaagaaaatggaatgaaagaaataaaaaattcc
tctgagtattttttaagtgagagagaagaaaaaaatataggaagtatggttgtaccaatt
ttagaaggaacaaaagtatttcttttagaagtgcaatctctcataacagatagtgggata
ggaatacctaaaagagttgttcagggatatgatagaaatagaatacaaattttaactgca
atagcagaaaaaaaattgtatgttccacttggaatgaaagatttatttgtcaatgttcca
ggtggattggcaatagaagacccagcagcagatttagcagtattgatgtcaattttatca
gtgcataaaggttttgctattagtcaaaaaatagcagcaataggagaacttggattaaga
ggagaaataagaaaggtatttttcttagaaagaagattaaaagaacttgaaaaacttgga
tttacaggagtttatgttcccgaatcaaatagaaaagagttagaaaaaaagaaatttaaa
ctaaaaataatatatttgaagaatttagatgaattattggaaaggatgaataagaatgac
taa
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