Fusobacterium vincentii 3_1_27: HMPREF0405_01736
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Entry
HMPREF0405_01736 CDS
T03625
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fnt03016
]
HMPREF0405_01736
Enzymes [BR:
fnt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HMPREF0405_01736
Transfer RNA biogenesis [BR:
fnt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0405_01736
Prokaryotic type
HMPREF0405_01736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
EFG35565
LinkDB
All DBs
Position
2:complement(204194..204931)
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AA seq
245 aa
AA seq
DB search
MGRKNIKIEFRYDGSRYYGFQRQPDKITVQGEIEKILRIVTKEEINLISAGRTDRGVHAY
HQVSNFYTSSNIPIEKYKYLLTRALPNDIDILSVEEVDENFNARHNAKIREYIYIISWEK
NPFEARYCKFVKEKIIAKKLEKIFSDFVGVHDFKNFRLNDCVSKITIREIYQIEVKYFGE
NKIKIYIKGSAFLKSQVRIMVGTALEIYYGRLPENHIRLMLTDFTKEYKKNLVEAEGLYL
NKISY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaagaatataaaaattgagttcagatatgatggaagcagatattatggtttt
caaaggcaacctgataaaataacagttcaaggtgagattgaaaaaattttaagaattgtt
acaaaagaggaaataaatttaatatctgctggtaggactgatagaggagttcatgcctat
catcaagtttctaatttttatacttcttccaatattccaatagaaaaatataagtacctt
ttaacaagagctttgcctaatgatatagatatattatcagttgaagaagttgatgaaaat
tttaatgcaagacacaatgctaaaattagagagtatatttacataatatcttgggagaaa
aatccttttgaagcaagatattgtaaatttgtaaaagagaaaattattgcaaaaaaatta
gaaaaaatattttctgattttgtaggagtacatgattttaaaaattttagattaaatgat
tgtgtaagtaagataactataagagagatttatcaaatagaagtaaaatattttggagag
aataaaattaaaatatatattaaaggaagtgcatttttaaaatcacaggttagaataatg
gttggaactgcacttgaaatatattatggaagattgccagaaaatcatataagacttatg
cttactgattttacaaaggaatataagaaaaatcttgttgaggcagagggactttatttg
aataagattagttattga
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