Fusobacterium vincentii 3_1_27: HMPREF0405_01929
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Entry
HMPREF0405_01929 CDS
T03625
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fnt
Fusobacterium vincentii 3_1_27
Pathway
fnt03030
DNA replication
fnt03430
Mismatch repair
fnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0405_01929
03430 Mismatch repair
HMPREF0405_01929
03440 Homologous recombination
HMPREF0405_01929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnt03032
]
HMPREF0405_01929
03400 DNA repair and recombination proteins [BR:
fnt03400
]
HMPREF0405_01929
Enzymes [BR:
fnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0405_01929
DNA replication proteins [BR:
fnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0405_01929
DNA repair and recombination proteins [BR:
fnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0405_01929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
EFG33736
LinkDB
All DBs
Position
1:complement(1692412..1695813)
Genome browser
AA seq
1133 aa
AA seq
DB search
MENNFVHLNLHTEYSLSEGVNSIDNFLIKAKELGMTSLAVTDYANMFCAVEFYQKAKKMG
IKPIIGLELPISNRDEQNIFSLTLLAKNYNGYKNLVKLASELYKKNENRELKLNKEILKE
HSQDLIALSSSMNGEIGKAILTNSSDEKISKIIDEYIEIFSKENFYLEIQANELPETKII
NDRFYDLAKLHNLELVATNNVYYVDRDGYELQDIIICIQSGLKVKEKNRKRAISKELYLK
SKDEMKRFLGEKFEKAIENTNHIADLCNVEISFGNLQFPYYEVPSEYSGMDEYLKTICHT
NIKKLYKEDLTKDILDRLEYELSVIIKMGYSGYFIVVWDFISYAKRRGIPVGPGRGSAAG
SLVAYCLGITMIDPIRYNLLFERFLNPERISMPDIDIDICRERRDELIDYVVHKYGRDRV
AHIITFGRMKARAAIRDIGRVLDIDLKKIDKLAKLISPFQTLEKTLKENVEVAKLYTTDI
ELQKVIDLAIRIENKVRHVSTHAAGILITKEDLDRTVPIYLDEKEGVIATQYQMKELEEL
GLLKIDFLGLKNLSNIQRTIDYIKKYKNIDVDLYKIPLDDKKVFQMLSLGDSTGVFQLES
TGIRKIMKRLKPDKFEDIVALLALYRPGPLQSGMVDDFINRKNGKEKIEYPHKDLEIILK
ETYGVILYQEQVMKIASYMADYSLGEADLLRRAMGKKNFAIMRENREKFIERAIKNGYTV
EKSEEIFELIDKFAGYGFNKSHSVAYAMISYWTAYFKVHYPAFYYAAVMTSEISETGDIA
YYFNDAKEHGIRVYSPNINSPSAYFEVKNEGITYSLAAIKNFGLTMAKKIVEDVKLNGKY
TTLEEFVFRNKKNGMNKRALEALILSGALDEIKGNRKEKFLSIDKVLDYSSKSSKTDEIQ
QMNLFGEAAKTIDRFNLAISEDFTLDEKLNKEKEFLGFYLSSHPLDRYKDILITFSIKKL
SEIDLEEKQVVKTFGTITNLKKIITKKEEQMAMFNLICYDRTISCIAFPRVYERFITELI
EKKTVYIEGKIQIDNYKGERTNKLLVDKLVELDKIYEYPAKKLFILIEPEDSYRYSRLKN
LINSNKGKTQVTFAIKNKDEKKLQTINNGIKLSKKFFEDLVELMGIGKIKFEM
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagaataattttgttcatttgaatttacatactgaatatagtttatcagagggtgta
aatagcatagataattttttaatcaaagcaaaagaactaggaatgacctcattggcagta
acagattatgccaatatgttttgtgctgttgaattttatcaaaaagctaaaaaaatggga
ataaagccaattattggtttagaattacctatttctaacagagatgagcaaaatattttt
agcttgactttacttgctaaaaactataatggatataagaatttagttaagttagcttct
gaattatataaaaaaaatgaaaatagagaattaaaattaaataaagagattttaaaagaa
catagccaagatttaattgcactttcatcttcaatgaatggagaaataggaaaggctatt
ttaacaaattcatcagatgaaaaaattagtaaaataattgatgaatatattgagatattt
tcaaaagaaaatttttatttagagatacaagctaatgaactgcctgaaacaaaaataata
aatgataggttttatgatttagcaaagttacataatctagaattagtggcaacaaataat
gtctattatgttgatagagatggttatgagttacaagatattataatctgcattcagtca
ggtttaaaggtaaaggaaaaaaatagaaaaagagctatttcaaaagaattatatctaaaa
tccaaagatgaaatgaaaagatttttaggagaaaaatttgaaaaagctattgaaaataca
aatcatatagcagatttatgtaatgttgaaataagttttggaaacttacaatttccatat
tatgaagttccgagtgaatattctggaatggatgaatatttaaaaactatctgccatact
aatattaaaaaattatataaagaagatttaactaaggatatcttagacagattagaatat
gaattatcagttattataaaaatgggatattctggatattttatagtggtttgggatttt
atatcttatgcaaaaaggagaggtatacctgttggaccaggtagaggttcagcagctgga
agtttagttgcctattgtttgggtataactatgatagaccctataaggtataatttacta
tttgaaagatttttaaatcctgaaagaatatctatgccagatattgatatagatatctgt
cgtgaaagacgagatgaactgatagattatgttgtacataaatatggtcgagatagagtt
gcacatattataacttttggaagaatgaaagcaagagctgcaataagagatataggtaga
gttttagatatagacttaaagaagatagataaacttgctaagttaatttcaccatttcaa
accttagagaaaaccttaaaagaaaatgttgaagttgcaaaattatatacaacagatata
gaattacaaaaagttatagacttagcaataagaatagaaaataaggtaaggcatgtatct
acacatgcagcaggtatacttataacaaaagaagatttagatagaacagttccaatttat
ttagatgagaaagaaggagttatagcaactcaatatcaaatgaaagaacttgaagagttg
ggacttttaaagatagacttcttaggattaaaaaatttatcaaatatccaaagaacaata
gattatataaaaaaatataaaaatatagatgttgacttatataaaattccacttgatgat
aaaaaagtttttcaaatgttatctttgggagattcaacaggagttttccagcttgaatca
acagggattagaaagataatgaaaagattaaagcctgataagtttgaagatatagtagcc
ttattggctctatatagaccaggacctttacaatcaggtatggttgatgactttataaat
cgtaagaatggaaaagaaaaaattgaatatccacataaagatttagagataatattaaaa
gaaacttatggtgtgattttgtatcaagagcaggttatgaaaatagcgagttatatggca
gattatagtcttggtgaagcagatttattaagacgggctatggggaagaaaaactttgct
attatgagagaaaatagagaaaaatttattgaaagagcaataaaaaatggctatacagtt
gaaaaatcagaagaaatatttgaattgatagataaatttgcaggctatggtttcaataaa
tcgcactctgttgcttatgctatgatttcatattggactgcatattttaaagtacattat
ccagctttttattatgcagcagttatgacttctgaaatttcagaaacaggggatattgct
tattattttaatgatgcaaaagagcatggaataagagtttattctccaaatataaattct
cctagtgcatattttgaggttaaaaatgaaggaataacatattcacttgcagcgattaaa
aattttggtttaactatggctaaaaaaatagttgaagatgtaaaattaaatggtaagtat
acgacacttgaagaatttgtttttagaaataagaaaaatggaatgaataaaagagcctta
gaagccttaattttatctggggcattagatgaaattaaaggaaatagaaaagagaaattt
ttatcaatagataaggtattggattatagttcaaaatcatcaaagacggatgaaattcaa
cagatgaatctttttggtgaggcagctaaaacaatagatagatttaatttggctataagt
gaagattttaccttagatgaaaagttaaacaaagaaaaagaatttttaggtttttatttg
agttcacacccattagatagatacaaggatattttaataacattttcaataaaaaaactt
tctgaaattgatttagaagaaaaacaagttgtaaaaacttttgggactattacaaattta
aagaagattataactaaaaaagaagaacagatggcaatgtttaaccttatttgttatgat
agaacaatatcttgtatagcttttcctagggtatatgaaaggtttataactgaacttata
gaaaagaaaactgtctatattgagggaaagattcaaatagataattataaaggagaaaga
acaaataaactattggtagataaattagtggaattagataaaatttatgaatacccagca
aaaaaattatttattttaatagagccagaagatagttatagatatagtagacttaaaaat
ttaattaattctaataaaggaaaaacacaagttacatttgctataaaaaataaagatgaa
aaaaaacttcaaacaataaataatggaataaaactaagtaaaaaattttttgaagattta
gttgagcttatgggcataggtaaaataaaatttgaaatgtga
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