Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN0374
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Entry
FN0374 CDS
T00077
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fnu
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Pathway
fnu03410
Base excision repair
fnu03430
Mismatch repair
fnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FN0374
03430 Mismatch repair
FN0374
03440 Homologous recombination
FN0374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnu03400
]
FN0374
DNA repair and recombination proteins [BR:
fnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FN0374
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FN0374
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FN0374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2278
Motif
Other DBs
NCBI-ProteinID:
AAL94577
UniProt:
Q8R6A6
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All DBs
Position
1002794..1005328
Genome browser
AA seq
844 aa
AA seq
DB search
MKKNTKWILENKTNYEKIFEDKREKKLDFIIEDLIENRNLSLDTNFDFNPFDLKDMDIAT
QRIFEAIKNNQKIYIYGDYDVDGITSVSLLYLAFSELGANVNYYIPLRDEGYGLNKEAIQ
ILKNENADLVISVDCGINSIEEINFANELNLDFIITDHHEITGGIPKALAVINPKREENI
YSFKYLAGVGTAFMLIYALYTQMNKLNDLEKYLDIVAIGTVADIVPLVSDNRKFVKKGLE
TLKNTKWIGIKQLLRKIFPDNWDTKEYFAYDIGYIIAPIFNAAGRLEDAKQAVSLFVEED
GFKCLSIIDKLLENNTERKDIQKKILEMSIAEIEKKQLYNKNLILVANKAFHHGVIGIVA
SKILDKYYKPTIIMEIKESEGVATASCRSIGDLNIVECLNSVSDILVKYGGHSGAAGFTI
KIENIEEFYVRIDRYVEENFDKDLFIKKLKIEKILAPYKVNYEFLKELEILEPYGAKNHT
PVFAFRNCQYENLRFTKNSTEHLMLDIKKDGYYFKNCIFFGGGDYYDIISSSKEIDIAFK
LKLETFKDRYMCKLQLEDVKNSIENSKFEDDYLELNGKDISFPIETVVYPKRLDIEEPLN
LIFNDYGVAITKDRTIIENIDNNLAKILTILKNKFYYEFSVKIKKKYLKTENINLHLEID
TLKNETLKSFPLKDALIFKEIKNLLIRNFEYNSIQKKVLASIFKDKKKTLVVMDRKRGAT
TIIDTIKCYCKYRNLSFSINNGKEKADFYIFENFTEMEEINSLITNNILVISNEDMEVSG
FNKIIDDYTIPNNIKCVDYHDISILKRNNSLYYPFLTDEEKNNILELIDKNKDVFSTREI
IVHF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatacaaaatggattttagagaataaaactaattatgaaaaaatttttgaa
gataaaagagaaaaaaaattagactttattattgaagatttaattgaaaatagaaatcta
tctctcgatacaaattttgattttaatccttttgatttaaaagatatggatatagctact
caaagaatttttgaggctataaaaaataatcagaaaatttatatctatggagattatgat
gtagatgggataacttctgtttctcttttatatttagcattttctgagctaggtgcaaat
gtaaattactatatacctttaagagatgaaggctatggtttaaataaagaagcaatacaa
attttaaaaaatgagaatgcagatttggttataagtgtggattgtggaataaattcaata
gaagaaattaattttgctaatgaattaaatttagattttataataactgatcaccatgaa
ataactgggggtataccaaaagcacttgcagttataaatcctaaaagggaagaaaatata
tattcttttaaatatcttgcaggagtaggaactgcttttatgttaatatatgcactatat
actcaaatgaataaattaaatgacttagaaaaatatttagatattgttgcaataggtaca
gttgcagatattgttcctctggtttcagataacagaaaatttgtaaaaaaaggtttagaa
actttaaaaaatactaaatggataggaattaagcaattacttagaaagatatttcctgac
aattgggatacaaaagaatattttgcctatgatataggctatattattgcaccaattttt
aatgctgctgggcgtttagaagatgcaaaacaggctgtaagcctgtttgtagaagaagat
ggttttaaatgcctttcaattattgataaacttttagaaaataatactgaaagaaaagat
attcaaaagaaaattttagaaatgtctattgctgagattgaaaaaaaacaattatataat
aaaaatttaattttggttgcaaataaggcatttcatcatggtgttattggaatagttgct
tcaaagattttagataaatactataagccaactataattatggaaattaaggaaagtgaa
ggtgttgctactgcttcttgtagaagtattggtgatttaaatatagttgaatgtttaaat
tctgtttctgatattttagttaaatatggaggacattcaggagcagcaggttttacaata
aaaatagaaaatatagaagaattttatgtaagaatagatagatatgtagaagaaaatttt
gataaggatttatttataaagaaattaaaaatagaaaaaatcctagcaccttataaagta
aactatgaatttttaaaagaattagaaattttagagccttatggagctaaaaaccatact
cctgtctttgcttttagaaattgccaatatgaaaatttaagatttaccaaaaatagtact
gaacatttaatgttagatataaaaaaagatggatactattttaaaaactgtatatttttt
ggtggtggagattattatgatattatttcaagttcaaaagaaattgatatagcttttaaa
ttaaaattagaaacatttaaagatagatatatgtgtaaattgcaacttgaagatgttaaa
aattctattgaaaatagtaaatttgaggatgattatttggaattaaatggaaaagatatt
tcttttccaatagaaacagttgtatatcctaaaagactagatatagaggagcctttaaat
ctaatttttaatgattatggtgtagcgataactaaagacaggacaattattgaaaatata
gacaataatttagcaaaaattttaactattttaaaaaataaattttattatgaattttct
gtaaaaattaaaaagaagtatttaaaaactgaaaacataaatttacatttagagattgat
actttaaaaaatgaaactttaaaatctttcccattaaaagatgctttaatatttaaagaa
attaaaaatcttttaattagaaattttgaatataattcaatacagaaaaaagtacttgct
tcaatttttaaagataagaaaaaaactttagtggttatggatagaaaaagaggagcaacg
acaataattgacaccataaaatgttactgtaaatatagaaatttaagcttttctataaat
aacggaaaagaaaaagcagatttttatatctttgaaaattttactgagatggaagaaatt
aattctttaataacgaataatattcttgtaatttctaacgaagatatggaagttagtgga
tttaataaaattatagatgattatactatacctaataatattaaatgtgttgattatcat
gatataagtattttaaaaagaaataatagtctgtattatccatttttaactgatgaagaa
aaaaataatatattagagttaatagataaaaataaagatgtattttctacaagagaaata
attgtacatttttag
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