Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN0592
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Entry
FN0592 CDS
T00077
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fnu
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Pathway
fnu03420
Nucleotide excision repair
fnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FN0592
03430 Mismatch repair
FN0592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnu03400
]
FN0592
Enzymes [BR:
fnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FN0592
DNA repair and recombination proteins [BR:
fnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FN0592
MMR (mismatch excision repair)
Other MMR factors
FN0592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
DEAD
CarD_TRCF_RID
COG4_N
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AAL94788
UniProt:
Q8R692
LinkDB
All DBs
Position
1245852..1248059
Genome browser
AA seq
735 aa
AA seq
DB search
MNLLEKLNDKQREAALQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVTFT
NKAAKEMRERVEELVGDVAKACTISTFHSFGMRLLRMYGKEVGYNSNFTIYDTDDQKRIV
KAILKGQNLSINGIKLTERDLVSMISKIKEQIKTLDEYSVMNKQIVEVYDKYNRALLESN
AMDFSDILLNTYKLLQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLCVV
GDENQSIYGFRGANILNILNFENNYNNAKIVKLEENYRSTTIILDAANELIKNNKSSKDK
KLWTQNGKGDLIKVLACDNGRDEVSRIIEFIRENHQNGVAYRDMTILYRTNAQSRIFEEG
LLRYSIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGIEKI
ITYARENNLNLLEALSHIKEISGLTVVGKEKLLEMYDIIKELKDLSYTETTSYIVQTLID
KIKYIDYIKDNYDDAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDNLEEK
SDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGTRAMFDEKEMEEERRLCYVALTRAEKKL
YLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIDIKKERLYFVDDYSDEIKTYGNNKKFE
KKKTEINTKNTIKLDDNAKKVIDNLGFKIGDKVKHKKFGLGVIKSIDAKKIYVQYVDGTK
EMAVILADKLLTKFE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttattagaaaagttaaatgataagcaaagagaagcagccttacaaattgatggt
tcaattttaattttagcaggagctggttctggaaaaacaagaacaattacatatagaatt
gcacatatgatagaaaatgttggaattagcccttatagtattttagctgttacatttaca
aataaagcagcaaaagaaatgagagaaagagttgaagagcttgtgggagatgttgctaag
gcttgtacaatttccactttccattcatttggtatgagacttttaagaatgtatggaaaa
gaagtaggatataattcaaattttactatctatgatacagatgaccaaaaaagaatagtg
aaagctattttaaaagggcaaaatctaagtataaatgggattaaattgactgagagagat
cttgtttctatgatttcaaaaataaaagaacaaataaaaactcttgatgagtactctgtt
atgaataaacaaatagttgaagtatatgataaatacaatagagctttattagaaagtaat
gctatggatttttcagatatacttttgaatacatataaattattacaaaaacctgaaata
cttgaaaaagttcaaaataaatataaatatataatgatagatgaatatcaagacacaaat
aatttacaatataaaataatagatttaatagcaagaaaatcatcaaatctatgtgtagtt
ggagatgaaaaccaaagtatttatggatttagaggtgcgaacattttaaatatccttaac
tttgaaaataactataataatgctaaaatagtaaaattagaagaaaattatagatcgacc
actataatattagatgcagcaaatgaacttataaaaaataataaatcatcaaaagataaa
aagttatggacacaaaatggaaaaggtgatttaataaaagttttagcttgtgataatggt
agagatgaagttagtagaataattgaatttattagagaaaatcatcaaaatggtgtagct
tatagagatatgacaatactatatagaactaatgctcaatcaagaatatttgaagaagga
cttttaagatatagcatacctcacaaagtttttggaggaataagtttttattcaagagca
gaaattaaagatataattgcatatttatctattattgttaatccacaggatgaattaaat
ttacaaagaataatcaatgttcctaaaagaaaagtaggagaaaagggaatagaaaaaata
atcacttatgccagagagaataatttgaatttacttgaagcactttctcatataaaagaa
atttctggactaactgttgttggaaaagaaaaacttttagaaatgtatgatataataaaa
gaattaaaagatttatcttatacagaaacaacatcatatatagtacaaactttaatagat
aaaataaaatatatagactatattaaagataactatgatgatgcagaagcgagaatagaa
aatatagatgaatttaaaaactctatcttagagcttgaaaatgttgtaggagaattgaga
ttaaatgaatatttagaaaatgtatctcttataagtgcaactgataatttagaggaaaaa
agtgattatgtaaaactaatgactattcataactcaaaaggtttggaatttccaatagtt
ttcttagttggctttgaaaatgaaatattccctggaacaagggcaatgtttgatgaaaaa
gaaatggaagaagaaagaagactttgctatgttgctttaacaagagctgaaaaaaaacta
tatttatctcatgcaactattagatttgtatatggacaagataggctttcaacaccatca
gtatttttaaaagaaataccagaaaaacttttagatattgatattaaaaaagaaaggcta
tattttgtagatgattattcagatgaaataaaaacttatggaaataataagaagtttgaa
aagaaaaaaactgaaataaatacaaaaaatactataaaacttgatgataatgctaagaaa
gtaattgataatttaggttttaaaataggggataaagtaaaacataaaaaatttggctta
ggagtaattaaaagtatagatgctaaaaaaatatatgtgcaatatgttgatggaacaaaa
gaaatggctgttatcttagcagataaacttttaactaaatttgaatag
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