Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN1069
Help
Entry
FN1069 CDS
T00077
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fnu
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Brite
KEGG Orthology (KO) [BR:
fnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnu03032
]
FN1069
03400 DNA repair and recombination proteins [BR:
fnu03400
]
FN1069
Enzymes [BR:
fnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FN1069
DNA replication proteins [BR:
fnu03032
]
Prokaryotic type
DNA Topoisomerases
FN1069
DNA repair and recombination proteins [BR:
fnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FN1069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_C_rpt
Toprim_4
CK_II_beta
Ribosomal_L27e
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AAL95265
UniProt:
Q8REN0
LinkDB
All DBs
Position
1714872..1717142
Genome browser
AA seq
756 aa
AA seq
DB search
MLKLPKKSEKNKLVIVESPAKAKTIEKILGSSYKVISSYGHIIDLPKTKIGVDVNNDFKP
SYNTIKGKGEVIKQLKEASKKADKIYLASDPDREGESIAWHIANTLKLDHNEKNRIEFHE
ITEKAIKDAVKNPRKINIARVNSQQARRILDRLVGYEISPFLWKLISPNTSAGRVQSVAL
KIICELEDKIKAFVPEKYWDVKGIFDTKYSLNLYKIDNKKIDKLKDEKLLDRVKKDLKKK
YEVISSKVSKKTKNPPLPLKTSTLQQLASSYLGFSASKTMMVAQKLYEGISIKGEHKGLI
TYMRTDSTRISEEAKEMARNYITKNFGKEYLGSATPKAKKESKNVQDAHEGIRPTDINYT
PENIMEFLDKDQFKLYNLIWQRFLISQLAAMKYEQFEYILEKDKIEYRGTINKIIFDGYY
KVFKEDEDLPIGDFPEIKEGDKFTLDKLDIKEDYTKPPARLTESSLVKTLEAEGIGRPST
YASIIDTLKKREYVELQNKSFVPTEIGYEVKTQLDKFFPNIMNIKFTAKLEDELDEVDSG
DKNWIDLLKVFYTELQKYEEKCKVVVEEELEKLVESDVIAKNGKPMIMKIGRFGRYLASQ
DTESKENISLKGIDISLEDIKKGKIFVKKQIEELGKKKEGQKTDIILDNGSRLLLKYGRF
GAYLESENYKEDNIRKTIPKEIKTKIEKNTIKKENDILYLKDIFDKIEKEEAEILKKAGK
CEKCGRPFKISNGRWGKFLACTGYPECKNIKKIEKK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaagttgcctaaaaaatcagaaaaaaataaattagtaatagtggaatcaccagct
aaagctaaaacaatagaaaaaattttaggaagttcatataaagtaatttcttcttatgga
catataattgatttacctaaaactaaaataggtgtagatgtaaataatgattttaaacct
tcttataatactataaaaggtaagggggaagttataaaacaattgaaagaagcttctaaa
aaggctgataaaatatatcttgcatctgaccctgatagagaaggagaatcaatagcttgg
catatagctaatacattaaaacttgaccacaatgaaaaaaatagaatagaatttcatgaa
attactgaaaaagcaataaaagatgcagtaaaaaatcctagaaaaattaatatagcaaga
gtaaattcacaacaagctagaagaattttagatagacttgtaggttatgaaataagtcca
tttttatggaaacttatttcgccaaatacaagtgcagggagagttcaatctgttgcttta
aaaataatttgtgaattagaagataaaatcaaagcctttgtcccagaaaaatattgggat
gtaaaaggaatttttgatactaaatacagtctaaatttatataaaattgataataaaaaa
attgataaactaaaagatgaaaaattacttgatagagtaaaaaaagatttaaaaaagaaa
tatgaagttatctcatctaaggtatcaaagaaaactaaaaatccacctttaccattaaaa
acaagtaccttacaacaattagcttcatcatatttaggtttttcagcaagtaaaactatg
atggttgcacaaaaattatatgaaggtattagtattaaaggagaacataaggggcttatt
acttatatgagaactgactctacaagaatttctgaagaagcaaaagaaatggcaagaaat
tatattactaaaaactttggtaaagagtatttaggttcagctactcctaaagccaaaaag
gaaagtaaaaatgttcaagatgcccatgaaggaataagaccaactgatattaactatact
cctgaaaatataatggaatttttagataaagaccaatttaaactgtataatttaatatgg
caaagatttttaatatctcaacttgcagctatgaagtatgaacaatttgaatatatatta
gaaaaagataaaattgaatatagaggaactataaacaaaataatatttgatggatattat
aaagtgtttaaagaagatgaagatttaccaataggagatttccctgaaataaaagaagga
gataaatttactcttgataaattagatattaaagaggattatactaagccacctgcaagg
cttactgaatcatcattggtaaaaactcttgaagcagaaggtattggaagaccttcaact
tatgcgagtataatagacactttaaaaaagagagaatatgtagaattacaaaataaaagt
tttgttccaacagaaataggttatgaagttaaaactcaacttgataaattctttccaaat
attatgaatattaaatttactgctaaattagaagatgaattagatgaagttgacagtgga
gataaaaattggatagaccttttaaaagttttttatactgaattacaaaaatatgaagaa
aaatgtaaggttgttgtagaagaagaattagaaaaattagttgaatctgatgttattgca
aaaaatggaaaacctatgataatgaaaattggaagatttggaagatatcttgcttcacaa
gatactgaaagtaaagaaaatatttcattaaaaggtattgatatttcacttgaagatata
aaaaaaggaaaaatatttgtaaaaaaacaaatagaggaattaggtaagaaaaaagaagga
caaaaaactgatattattttagataatggttcaagattactattgaaatatggaagattt
ggagcatatttggaaagtgaaaactataaagaagataatattagaaaaactattccaaaa
gaaataaaaactaaaattgaaaaaaatacaataaaaaaagaaaatgatattttatattta
aaggatatatttgataaaattgaaaaagaagaagcagaaatattaaaaaaagctggaaaa
tgtgaaaaatgtggtagaccatttaaaattagcaatggaagatggggtaaatttttagct
tgtactggctatcctgaatgtaaaaatattaaaaagatagaaaaaaaataa
DBGET
integrated database retrieval system
