Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN1708
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Entry
FN1708 CDS
T00077
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fnu
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Pathway
fnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FN1708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnu03019
]
FN1708
03016 Transfer RNA biogenesis [BR:
fnu03016
]
FN1708
Enzymes [BR:
fnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FN1708
Messenger RNA biogenesis [BR:
fnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FN1708
Transfer RNA biogenesis [BR:
fnu03016
]
Prokaryotic type
tRNA degradation factors
FN1708
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
UvrC_RNaseH
SAC3
KH_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AAL93823
UniProt:
Q8RIA1
A0ABM6TNN3
LinkDB
All DBs
Position
203428..205539
Genome browser
AA seq
703 aa
AA seq
DB search
MKELMFDEKIMELELAGRTLKVSTGKISRQSSGAIVIQYGDTVLLSTANRSKEARKGADF
FPLTVDYIEKFYSSGKFPGGFNKREGRPSTNATLVARLIDRPIRPMFPDGFNYDVHIVNT
VLSYDEINIPDYLGVIGSSLALMISDIPFLGPVASVIVGYKNGEFILNPSPKELEESELD
LIVAGTKEAVNMVEAGAKELDEETMLKAIMFAHENIKKICEFQEEFSKLYGKENIEFEKP
EVLTLVKDFIDTNGYERLQQAVLTTGKKNREDAVDSLEEELMEKFIQENYPDVPEEELPE
DIILEFKTYYHDLMKKLVREAILYHKHRVDGRTTTEIRPLDAQINVLPIPHGSALFTRGE
TQSLAITTLGTKEDEQLIDDLEKEYYKKFYLHYNFPPYSVGEVGRMGSPGRRELGHGSLA
ERALSYVIPTEEEFPYTIRVVSEITESNGSSSQASICGGSLSLMSAGVPIKEHVAGIAMG
LIKEGEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALNQAH
QARIQILELMNNTISKPAELKSNVPRIQQITIPKDKIAALIGPGGKNIKGIIEQTGATVD
ITDDGLVSVFAKDADTLEKTLKLVDSFVREVEYNEVYEGRVVSIMKFGAFMEILPGKEGL
LHISEISPERVEKVEDVLSVGDVFKVRVISMEGGKISLSKKKV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaattaatgtttgatgaaaaaattatggagctagaactcgctggaagaacttta
aaagtttcaactggtaaaatttctagacaatctagtggagctattgtaattcaatatgga
gatacagttcttctatctactgctaaccgtagtaaagaagcaagaaaaggtgcagacttt
ttcccattaactgttgactatatagaaaaattttattcaagtggtaaatttccaggagga
tttaacaaaagagaaggaagaccttcaacaaatgccacattggtagcaagacttattgat
agaccaataagaccgatgtttccagatggatttaactatgatgtacatatagttaatact
gttttatcttatgacgaaataaatatacctgactatttaggtgtaattggttcatctctt
gcacttatgatttctgatattccattcttaggacctgttgcaagtgtaatagttggatat
aagaatggtgaatttattttaaatccttctccaaaagaattggaagaaagtgaacttgat
ttaatcgttgctggaacaaaagaagctgtaaatatggttgaagcaggggcaaaagaatta
gatgaagaaactatgttaaaagcaattatgtttgcacatgaaaatattaaaaagatttgt
gaattccaagaagaattctctaaattatatggaaaagaaaatatagagtttgaaaaacca
gaagtattaactcttgttaaagatttcattgacactaatggatatgaaagattacaacaa
gctgttttaactactggtaaaaagaatagagaagacgctgttgactcattagaagaagaa
ttgatggaaaaatttatacaagaaaattatcctgatgttccagaagaagaattaccagaa
gatataatattagaatttaaaacttactatcatgatttaatgaaaaaattagttagagaa
gctattctttatcataaacatagagttgatggaagaacaaccactgaaataagaccatta
gatgctcaaataaatgtattacctattcctcatggttcagcattatttacaagaggagaa
actcaatctcttgcaattacaacattaggaactaaagaagatgagcaattaatagatgat
ttagaaaaagaatattataaaaaattctatttacactataacttccctccatattcagtt
ggagaagttggaagaatggggtctcctggaagaagagaattaggacatggttcacttgcc
gaaagagctttaagctatgttattcctactgaagaagaattcccttacactataagagtt
gtatctgaaataactgaatctaacggttcatcatcacaagcttctatctgtggtggttca
ttatcacttatgtcagctggtgtccctataaaagaacatgttgctggtatagcaatgggg
cttattaaagaaggagaagaatttacagttctaacagatataatgggactagaagaccac
ttaggagatatggacttcaaagttgctggtacaaaatctggaattacagctttacaaatg
gatattaaaattacaggtataacagaagaaattatgagaattgctttaaatcaagctcat
caagctagaattcaaatattagagcttatgaataatacaatttctaaacctgctgaatta
aaatctaatgtacctagaatacaacaaattactattccaaaagataagattgcagctctt
attggaccaggtggaaaaaatattaaaggtatcatagaacaaacaggagctactgttgat
ataactgatgatggacttgtatctgtctttgcaaaagatgctgatacattagaaaaaact
ttaaaactggtagattcttttgtaagagaagttgagtacaatgaagtttatgaagggcgt
gtagtttctattatgaaatttggtgcatttatggaaattctacctggaaaagaaggttta
cttcatatttctgaaatttcaccagaaagagttgaaaaagttgaagatgtactttcagtt
ggagatgtatttaaggtaagagttatttctatggaaggtggaaaaatctctttaagtaaa
aaaaaggtttaa
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