Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN2126
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Entry
FN2126 CDS
T00077
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fnu
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Brite
KEGG Orthology (KO) [BR:
fnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fnu03032
]
FN2126
03400 DNA repair and recombination proteins [BR:
fnu03400
]
FN2126
Enzymes [BR:
fnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FN2126
DNA replication proteins [BR:
fnu03032
]
Prokaryotic type
DNA Topoisomerases
FN2126
DNA repair and recombination proteins [BR:
fnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FN2126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
YqeC
DUF7077
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AAL94210
UniProt:
Q8RHB1
LinkDB
All DBs
Position
complement(636396..638315)
Genome browser
AA seq
639 aa
AA seq
DB search
MEEKMSYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKI
EVKILPENIIEVMDNGRGIPTDIHPKYGKSAMEIVLTILHAGGKFENDNYKVSGGLHGVG
VSVVNALSEWLEVEVRKNGVVHYQKYHRGKPEEDVKVIGSCDESEHGTIVRFKADGEIFE
TLIYNYFTLSNRLKELAYLNKGLTIILSDLRKEEKKEETYKFDGGILDFLNEIVKEDTTI
IEKPFYVSSEQDNVGVDVTFTYTTSQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDV
GKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSS
LKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAE
ECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGT
SIGETFDIAKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKV
SSGKQIIYAYNDLELKNILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKV
SIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNIDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttggaggaaaaaatgagttatgaggcacagaatataacagttctggaaggattggaagct
gttaggaaaagaccaggaatgtatatagggacaacatcagaaagaggactacaccatttg
gtgtgggaaatagtagataactctgttgatgaggctttagctggatattgtgataagata
gaagtaaaaattcttccagagaatattattgaagttatggacaatggaagaggaattcca
acagatatacatcctaaatatggaaaatcagcaatggaaatagttttaacaattttacat
gctggtggaaaatttgaaaatgataactataaagtttcagggggattacatggagttgga
gtttctgttgttaatgccctttctgagtggcttgaagtagaagtgagaaaaaatggagtt
gtgcattatcaaaaatatcatagaggaaaaccagaagaagatgttaaagttattggttca
tgtgatgaaagtgaacatggtacaatagtaagatttaaagcagatggagaaatttttgaa
acattgatatataattacttcacactttcaaatagattaaaagaattggcttatttaaat
aaaggcttaactataattctttcagatttaagaaaagaagaaaagaaagaagaaacatat
aaatttgatggaggaattttagatttcttaaatgaaatagtaaaagaagatacaactatt
atagaaaaaccattttatgtttcatctgaacaagataatgttggagtagatgtaacattt
acttatacaacatcacaaaatgaagtaatttattcttttgttaacaatattaatactcat
gaaggtggaacacatgttcaaggttttagaactgcacttacaaaagttataaatgatgta
ggaaaagcacaaggtttactaaaagataaagatggtaaacttatgggaaatgatataaga
gaaggagttgttggaatagtatctacaaagataccacaacctcaatttgaaggacaaact
aagggtaaacttggaaattcagaagtatctggaatagtaaataccattgtttcaagtagt
ttaaaaatattcttagaagataaccctaacataacgaaaattataattgaaaagatatta
aattctaaaaaagcaagagaagctgcacaaaaagcaagagaacttgttttaagaaaatct
gttttagaagttgggtctctaccaggaaaattagcagactgtacttctaaaaaagcagaa
gaatgtgaaatctttatagtcgaaggagattcagctggaggttctgcaaaacaaggtaga
gatagatataatcaagctatattaccacttagaggtaaaattataaatgttgaaaaagca
ggattacataaatctttagaaagttctgaaataagagctatggttactgcatttggaaca
agtataggagaaacttttgatatagctaaattgagatatggaaagataattcttatgaca
gatgctgatgttgatggtgcacatataagaacattgattttaactttcctatatagatat
atgaaagatttaattactgaaggaaatatctatattgcttgtcctccactatataaggtg
tcatcaggaaaacaaataatttatgcttataatgatttagaattaaaaaatattttagga
caaatgaatcaagataataaaaaatatactattcaaagatataaaggacttggagaaatg
aatccagaacaactttgggaaacaacaatgaacccagatggaagattacttctaaaagtt
tcaatagataatgcaagagaagctgatatgctttttgataaacttatgggagataaggtt
gagccaagaagagaatttatagaagaacatgcagaatatgtaaagaatatagatatataa
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