KEGG   Frankliniella occidentalis (western flower thrips): 113201924
Entry
113201924         CDS       T07591                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
foc  Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:foc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:foc04812]
    113201924
Cytoskeleton proteins [BR:foc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     113201924
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_HPS5 eIF2A Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_RIG_1st PROPPIN VPS8_N
Other DBs
NCBI-GeneID: 113201924
NCBI-ProteinID: XP_026271695
UniProt: A0A6J1RXN1
LinkDB
Position
Unknown
AA seq 884 aa
MAISTKRSWKLQDFVAHSANVNCLALGHKSGRVLVTGGDDKKVNLWAVGKHNCIISLSGH
TTPVECVRFGHTEELVCAGSQTGALKIWDLEAVKIVRTLTGHKSAIRCMDFHPYGDFLAS
GSTDASIKLWDTRRKGCIFTYGHKLTVNSLKFSPDGQWIASGGDEGIVRLWDIRAGKVLK
EFAEHSGAVTSVEFHPHEFLLASGSVGRSVNFWDLENFQLVSSTERDGGSVRCLYFSQGG
ECLFAASPECLRVCGWEPSRIYDSLAVGWGKVADIATAQNQLIGASFHMMNVALFVVDLK
KVQPFGGPVINPNDSINSSPFRHGQSARKSFSKETQLNLSKPPMSVRTIEENDRSETDPE
DETVSHILDVKDYEAIFLPNRSLNRSPPPIPFPAPADDASHSSPSHSNASSLTIQEGVGM
PQIIQPLLPMKVSRNSPEPSEQMFSGTGDCVDPNDSPDYYQPQPIHLLPEDDSYGDQIPE
PQPRQRRPSQLSPVRQRSEKHSPVLSGSARSKGSSPTPVASHRMSYREDTHSSFDNDFPV
KLSSIRHSPSEPALNRPNAGHSRSSSLSRNSVVANSSSTGNIKQIGSSNDVNSSTSGFHI
KHSITPGFNLGTDVSVSYLGKNSTTTPSSKGALPMVAPRTKVATEENLRRQEKTSVDVLE
RQRPPVDDEIDDIIPISMDKPSNLDLEDFLPNRLQRSVNFYQQHQYLDMSEAEVLSSIMR
GHESMMTVMNGRHRSLQIIYSLWHNKDLKVAVDTALEMNDLAIVVDLLGILTLRPSIWNL
DLCVSLLDPIHELLQSKYEMYMTVGCNTLRLILRNFSSLIKTNVQAPIHTVGVDISREER
YNKCMKCYESLQSIRSFLLKRQTVQGKLGHTFREITILMQSLDN
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggctatatctaccaaacgatcgtggaaacttcaggactttgttgctcattcggccaat
gtcaattgccttgccctgggacacaagtctgggagagtcttagttactggaggagatgat
aaaaaagtgaatttatgggcagtagggaaacacaactgtatcattagcctcagtggacat
actacaccagttgaatgtgtgcggtttggtcacactgaagagctggtttgtgctggatca
cagacaggagcactcaaaatatgggatttagaagcagtaaaaattgttcgcaccttaact
gggcataaatctgccatacgatgtatggattttcatccatacggggattttcttgcctca
ggttctacagatgccagtatcaagctctgggacacaaggcggaaaggttgtattttcaca
tatggacacaagcttacagttaacagcctcaaatttagtcctgatgggcagtggattgca
tctggaggagatgaaggcattgtcaggttatgggatatacgtgctggcaaggtcttaaaa
gagtttgcagagcattctggagccgtaacttcagtggaattccaccctcatgaatttctg
ctagcatcaggtagtgttggtcggtctgtaaatttttgggatttggagaactttcaatta
gtatcctcgactgaaagggatggaggctctgtgaggtgtctatacttcagtcaaggtgga
gaatgtttatttgctgcctccccagaatgtttgcgtgtttgtggatgggaaccatccaga
atttatgactcattagcagttggttggggtaaagttgctgatattgcaacagctcagaat
caattgattggtgcatcttttcacatgatgaatgttgcactatttgtggttgatctcaaa
aaggtgcagccttttggtggcccagttattaatccaaatgattccattaattcttcacct
ttccgccacgggcaaagtgctaggaaaagctttagcaaggaaacacagcttaacttgtca
aaacctccaatgagtgttcgtaccattgaagaaaatgaccgatctgaaacagatcctgaa
gatgaaacagtctctcacatacttgatgtaaaggattatgaggcaatttttttgcctaat
agatcattgaatcgcagccctcctcctattcctttccctgctcctgctgatgatgcttca
catagttctcctagtcattcaaacgcatcatcattaaccatacaagaaggtgttggaatg
cctcaaataatacaaccattgttgccaatgaaagtatctcgcaattccccagaaccatct
gagcagatgtttagtggaactggagactgcgtggaccccaatgactcacctgattattat
caacctcaacctattcatttattacctgaagatgattcatatggtgaccaaattccagaa
cctcaaccaagacagcgaaggccatctcagctctctccagttagacagaggagtgaaaag
catagtcctgttctttctggctctgcccgttcaaagggtagctctcctactcctgtagct
tcacacagaatgagttacagagaggatactcactcttcatttgacaatgatttccctgtc
aaactaagcagtatacgccatagtccttcagaacctgccctaaaccgaccgaatgctgga
cattcaagatcaagttctttaagccggaacagtgttgtagcaaatagctctagcactggt
aatattaaacaaataggctcctcaaatgacgttaatagctcaactagtggctttcacatt
aaacattccatcaccccagggtttaatcttggcactgatgtctcagtgtcttatctgggg
aagaactccaccactaccccctcctccaaaggtgcacttcctatggtagcacctcgtact
aaagtagccacagaagaaaatttacgaaggcaggaaaaaacaagtgttgatgtccttgaa
agacagaggccaccagttgatgatgaaattgacgatatcattccaatatccatggataag
ccctctaacctcgatttagaggattttctgcctaaccgccttcaaagatctgttaacttt
tatcaacagcaccagtacttagatatgtcagaggcagaagttttgtcatccatcatgcgt
ggacatgaatctatgatgacagttatgaatggtcgacacagaagtttacaaataatttat
tctctctggcataataaagacttaaaggtggcagttgatactgctttggaaatgaatgat
cttgctattgttgttgatttacttggcatcttgactcttcgaccgtctatatggaactta
gatctttgtgtttccttacttgaccctattcatgaactactgcagagcaaatatgaaatg
tacatgacagtaggatgcaatactctccgactcattctaaggaatttttcttctttgatc
aaaactaacgttcaagcgcctatccacacagttggagttgatatatctcgagaagaaagg
tataataaatgtatgaagtgttatgaaagtttacagtcaatacgctcttttttgttaaaa
agacagactgttcaaggaaaattaggacacacattccgagaaataactatactaatgcaa
tccttggacaactga

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