Frankliniella occidentalis (western flower thrips): 113201927
Help
Entry
113201927 CDS
T07591
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113201927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113201927
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113201927
mRNA degradation factors
5'-3' decay
Decapping complex
113201927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
ISP_coupler
Motif
Other DBs
NCBI-GeneID:
113201927
NCBI-ProteinID:
XP_026271713
UniProt:
A0A6J1RTN8
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MLKSISSYFFAGAEEEKQPVEEVNSTAMTPSDNTQTVQFQGSDEQHSTEIYSNDVTIIPS
AGNHDKSSSHVKTNNIVDHSWDVRFYKGQLLAVHLSGKFIAFGIQVVSKSESMVRIVNRQ
NNHRYLCKGITGVVQDIAFAHIATQVILGIVDEAGTLFIYRIEDTPNALQTKLILHVSQK
NVRDQIGLIHRLIWCPYIPEEDSDAKQPEDEEVANMLVVTHGPRAEIWNVQMVIQKHGTD
KELHPEDVKEGLLSLNHHEVDIVDAAFSPDGTALATASLDGYVKFFQVYMQGQEEPRCLH
MWQPHDGKPLSSLFFLDNHRSHASDTQFWKYVLTGSENNSELKIWSCETWSCLQTISFAS
KQTSTVPSSISLKAGIDLSADFIMLSDINNRVLYVLQLQKDSIARVCAVSEFLLPNPILS
FGIVDAGIRNVKRHHDVTSDLESDLMDNNEDDEDDDGGDDDDEEKALQVVIRMYVVHPKS
LRGCIISFDPPVEAKKSMSIYSEDTLGKESPENQPQLIEAFAEGMSDVSENCLAKGNTQN
SVTSTLALAGTDSANNLTPLPELHQSTEPKCLSNLMTPDDFSSSNEKNDVDATSSPLLPV
SEQLGPQLGELCGEKTRQQADPSSKHEATNGRALKTKGKSNGKAMADTCLNRKREPTASG
GSSPSREVEEILSHGSSDCLSSTTPFNFQNAAVPEDPSIIKAETSLGTVPTGEAIPLILP
SNPCGLLPLALTTSLQASTIATTTSALQAVVAAAQEKPPVMVTAEQLEKQQTQWSRVDLL
LETLQQQQVEIKSLRQELGSLRLAQTTSSEPVIADKIQALLLSQQKQLEMSIQNAIQNAL
QNSVQNLLRARDQQENQRQEALMSVISQTVSNIITSQLPTLISQEIQSEVVPIVRSNVQQ
MKQQVATEVATKLAATDQLMKDNLAKLVTNKSFMDMLNQSLLIMAQPTLQSLYKESFGTL
VPTMEKVTQSMFHQINNSFSKGTQEYMQYVDGTVEKQRRQYDRAHEMLQSVAESMQTSHE
QQTLLLKSTLDNNLQKLQTSLLDKLNKTVSDTVKGNLAQGFKQQKAVIEESVLTSLNAVR
SRAVSPAQSVSDYASMERRVLNFIQERDYNSAFQQALSASSIALVLAVCERVDPQEVFSS
QPFPLKQNVLLSLIQQLSVDLNDHTELKRRYLEEAVMSLDPNDSDVRKHLYIISKLQEQL
MAFVQGHPGSALSRQMKMLYMATSNLVQSPTSPS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatccatttcgtcttacttcttcgcgggagctgaggaagaaaaacaaccagta
gaggaagtaaactccacagccatgacgccgtcagacaatacgcagactgtgcaattccag
ggaagtgacgaacagcacagcacagaaatttacagcaatgatgtgaccattattccaagt
gctggaaatcatgacaaaagtagctctcacgttaaaaccaacaatattgttgatcatagt
tgggatgtcaggttttacaagggtcaactcttagctgttcatctctccggaaaatttatt
gcctttggtattcaagttgtttctaaaagtgaaagtatggttcgtattgtgaaccgtcaa
aacaaccaccgatatctctgcaagggaataactggggttgtgcaagatatagcatttgct
cacattgctactcaagtaatacttggtattgttgatgaagcaggaacattatttatctac
cgcatcgaagacactcctaatgctttacaaacaaaactgatattgcatgtatcacaaaaa
aatgtccgtgaccaaataggtctcatccaccgcttgatttggtgtccctatatccctgaa
gaagactcagatgccaagcaacctgaagatgaagaagttgccaatatgcttgtagtcact
catggtccaagggcagaaatttggaatgtgcaaatggttattcagaagcatggaactgac
aaggagttgcaccctgaggatgttaaagaagggttgctttctctgaaccaccatgaggtg
gacatagttgatgcagcattctccccagatgggacagctttagcaacagcaagcttagat
ggatatgtgaagtttttccaggtgtacatgcaaggacaagaagagccaaggtgtcttcac
atgtggcagcctcatgatggaaaacctttatcatcactattcttccttgataatcatcgt
tcacatgcatcagacactcaattctggaagtacgttttgactggatcagaaaacaactct
gaattaaaaatttggtcgtgtgagacatggtcttgcttgcagacaatctcttttgcctcc
aaacaaacatctacagttcccagttctattagcttaaaagcgggcattgatctctctgcc
gattttattatgctctctgacataaacaatagagtactgtatgtacttcaactgcagaag
gactccatagcaagggtttgtgcagtttctgaatttctattacccaaccctattcttagt
tttggtattgttgatgctggcatacgtaatgtgaagaggcaccatgatgtgacaagtgac
ttggaaagcgatcttatggacaataatgaagatgatgaagatgatgatggaggagatgac
gatgatgaagaaaaggctcttcaggtggtcatccgcatgtatgttgtacaccccaagtct
ttaagagggtgtataatttcatttgatccgcctgttgaagcaaaaaaatccatgagcata
tattctgaagatactctaggaaaggaatctcctgagaatcaaccacaactgattgaagct
tttgctgagggcatgtctgatgtctctgaaaactgtctggccaaaggaaatacccaaaat
tcagtgacttcaactttagctttggctggaactgatagtgcaaataatttgacaccgctc
cctgagcttcatcagtctacagagccaaagtgtctcagtaacttgatgactcctgatgac
ttcagttcctctaatgagaagaatgatgttgatgcaactagcagtcctttactgcctgtg
agcgagcagttaggaccacagttaggtgaactttgtggtgagaaaaccagacagcaagct
gatccttcatccaaacacgaagctacaaatggcagagctttgaagactaaagggaaaagc
aatggaaaggccatggctgacacatgtctaaacaggaaaagagagcctacagcaagtggt
ggcagtagccccagtcgtgaagttgaagaaattttgtcacatggcagctctgattgtctt
tccagtacaactccctttaacttccaaaatgcggctgttcctgaagatccatcaatcatc
aaggcggagaccagtttaggaacagtaccaacgggcgaagctatacccttgattctgcct
tcaaatccctgtgggcttttaccactcgctctgacaacctcactccaagcttcaaccata
gcaacaactacaagtgcgttacaagcagttgttgcagcagctcaagagaagccacctgtc
atggtgacagctgaacagttagagaagcaacaaactcaatggagtcgtgtagacctgctt
ttggaaactcttcaacaacagcaagtagaaattaagagtttgagacaagaacttggctca
cttcgactagctcaaactacttcctctgagcctgtcatagcagataaaatccaggctctg
cttctgtcccagcaaaagcagcttgaaatgagcattcagaatgctatacagaatgctctg
caaaattctgttcagaacttattgcgtgctagggaccaacaagaaaatcaacgtcaggaa
gcattaatgtctgtcatttctcaaactgtgagcaacataataacctctcaactcccgacc
cttatctctcaagaaattcaatcggaagtggttccaattgtaaggagtaatgttcagcaa
atgaagcaacaagttgctacagaagttgcaaccaaacttgcagcaacagatcagctaatg
aaagataatttggccaaactagttactaacaagtccttcatggatatgctcaatcagtcc
ctcttaattatggctcaaccaacattgcaaagtctttacaaagaatcttttggaacattg
gtacctacaatggaaaaggtcacccaaagtatgttccaccaaataaacaattctttttca
aaaggaacccaagagtatatgcaatatgttgatgggacagttgaaaagcaacggaggcaa
tacgatagggctcatgaaatgttgcaatcagtcgctgagtcgatgcaaacttcacatgaa
cagcaaacacttttacttaaaagtactcttgataataatctacaaaagctacaaactagc
cttcttgataaacttaacaaaacagtcagtgatacagtcaagggtaacttagcccaaggc
tttaaacaacagaaagctgttatagaagaaagtgttctgacaagtttgaatgcggttcgc
tcaagagccgttagtcctgcacaatctgtaagtgactacgccagtatggagcgacgtgtc
ttgaattttattcaagaaagggattataactcagcattccaacaggccttatcagcatca
agcattgctcttgttcttgctgtatgtgaaagggtcgatcctcaagaggtgttttcttct
caaccattccctttgaaacaaaatgttcttttatctttgattcaacagctgtctgttgat
ttgaatgatcatactgagctgaagcgaaggtatctggaagaagcagtcatgagtttagat
cctaatgactctgacgttcgtaagcacctctatatcataagcaaattgcaggagcaattg
atggcatttgtgcagggtcatcctggttcagcattgagccgtcaaatgaaaatgttatac
atggccacatcaaatcttgttcaatcaccaacctcgccctcataa
DBGET
integrated database retrieval system
