Frankliniella occidentalis (western flower thrips): 113202210
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Entry
113202210 CDS
T07591
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113202210
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113202210
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
Helicases
113202210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MutH
HEM4
Motif
Other DBs
NCBI-GeneID:
113202210
NCBI-ProteinID:
XP_026272104
UniProt:
A0A6J1RSW2
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MDAHDLFRKLTSGVRFSKNKRSKPVVRTEKQVESVAVKDEEDFNAAEEWMNPGDGSNSDD
DSQMNSDSETENDDDSDNSDKLNKSSDRNGKRNGSQTQDDSDSDADNSIDGPITLLGNMS
SDKAIKTTNSKPVKQKKKKLTPEEKLKAQEEEKVNILRKKLRLSVSGDGVPAPVESFDEL
QARFGVSANLINNLKKSGYTEPTPIQSQAWPIMLKNRQVLACAPTGSGKTAAFLLPLLHH
LRGLRHDGIRAVIVSPTRELARQTYRECSRLAENSGLNIHIISKVNLSNAKLTLEKTNKF
DILITTPNRLVFLLKQEPAVLSLKSVRWLIVDESDKLFEAGPRGFRDQLAAIYQACDSQN
IKRGMFSATHGAHVAKWCKQNLAGLIAVTVGHRNTTADKVQQELVFVGSEQGKLIAMREL
ISKGLQPPVLIFVQSKERAKELFSELLYDGINVDVIHADRTQLQRDNVVKSFREGKIWVL
ICTELMGRGIDFKGVNLVVNYDFPPSAVSYIHRIGRTGRAGREGKAVTFFTSSDSPILRS
IATVMKDSGCDVPQYMLELKKVSKKTKREREKYAPERASISTVPKVEKQKQEWLHTKIEN
GKRKKKGLPPLPAKPSKAKKRKAENDEGADTKKRKMSESNKSNYSKGGKLSSKAKNWKQS
TNGKQSNNGKQSTKGKPPGKKMKFRTKKNETN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccatgatttgttcaggaaactgaccagcggcgtacgttttagcaaaaacaaa
cgtagcaagcccgtagttcgcacagagaagcaagttgaatctgtggcagtgaaagatgag
gaggatttcaatgctgccgaagaatggatgaaccctggtgatggttcaaactcagatgac
gactctcagatgaattctgattcagagactgaaaatgacgatgacagtgataacagtgac
aaacttaataaatcctcagatcgtaatggaaaaagaaatggttctcagactcaagatgac
tctgactcggatgcagacaattcgattgatggacctatcactctattaggtaatatgtcc
tcggataaggccatcaaaaccacaaactctaagccagtgaaacagaagaagaaaaagctt
acgcctgaagaaaaattaaaagctcaagaagaagagaaagttaacatattaaggaaaaaa
ctccgactatcagttagtggtgatggcgttccagcacctgttgagtcatttgatgaactt
caggcccgttttggagtatcagctaatttaattaataacttgaagaagtcaggttataca
gaacctacgccaattcaatctcaagcgtggcctatcatgttaaagaaccgtcaggttttg
gcttgtgcacccactggatctggtaaaacggcagcgttcttgttacctttattacatcac
ttgagaggactgcgccatgatggcatccgtgctgtcattgtgagtccaacaagagagtta
gcaaggcaaacttacagagaatgctcgcgtcttgcagaaaattcaggattaaatatacat
attattagcaaagtgaatttatccaatgctaaacttactttggaaaaaactaacaagttt
gacatcctcataactacacctaacagattggttttcttgttaaaacaagaacctgctgtg
ctatctttgaaaagtgttcgatggctcattgtagatgaatcagataagctctttgaagct
ggtcccaggggttttcgagaccagctagcagctatttatcaagcttgtgattcccaaaat
atcaagagaggcatgtttagtgcaacacatggtgctcatgtagctaagtggtgtaagcag
aatcttgcgggtttaattgctgtaactgtcggccatagaaatacaactgctgataaagta
caacaagaactagtgtttgttggcagtgagcaaggaaaacttatagccatgagagaactg
ataagcaagggattgcaaccacctgtccttatttttgttcaatcaaaagagagagcaaaa
gaattattctctgagctattgtatgatggaataaatgttgatgtaattcatgcagacaga
actcaactgcagagggataatgttgttaaaagctttagagaagggaaaatctgggtactt
atatgtactgagctgatgggcagaggtattgatttcaaaggtgttaacttggtagtgaac
tatgactttccaccatctgctgtatcttacatccacagaatagggagaactggtcgtgct
ggtcgtgaaggaaaagcggtaacatttttcacttcaagtgattcgcccattttgaggagt
attgcaactgttatgaaagactctggctgtgatgtgcctcagtatatgcttgagttgaag
aaggtgtctaagaagacaaaacgtgaacgagagaaatatgcaccagaaagagctagtata
tccactgttccaaaggtggaaaagcagaaacaagagtggctgcatactaaaatagaaaat
ggcaagcgaaaaaagaaaggtctaccacctctccctgccaaaccaagcaaagcaaagaaa
cggaaggctgagaatgatgaaggagctgatacaaaaaagaggaaaatgtctgaaagcaat
aagtcaaattactcaaagggtggaaaactgtcatctaaggcaaagaactggaagcagtca
actaatggaaagcagtcaaataacggaaaacagtcaactaagggtaaaccccctggaaag
aaaatgaaatttagaacgaagaaaaatgaaacaaattga
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