Frankliniella occidentalis (western flower thrips): 113202242
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Entry
113202242 CDS
T07591
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
foc01001
]
113202242
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113202242
Enzymes [BR:
foc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113202242
Protein kinases [BR:
foc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
113202242
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113202242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
PHD
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
113202242
NCBI-ProteinID:
XP_026272153
UniProt:
A0A6J1RT12
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MEPFEGQPEDVLIGKQEHLENSSNGTLNDDNVDGLDQSNPNLLDSNNHDDDGSMLPTDCL
NGEVEAPALDGMDQDAPGSPTTGVDVPGVNTWSNIKCVYCETVLTLNDQPRLLECLHTSC
MSCITSKINEPNQDTGDVVVEVNSIGCPECSVTSIINGIIDNQFLLELCMESEMGANPDL
NKSLSDLKCSSCQDSAPATSWCVDCAEFICDDCVQAHQRLKITKDHSIKPKEEGDLENHT
LASTATSKNFYCNIHPQEQLTLFCETCDRLTCRDCQLTEHRDHKYKFSHEIASESRGMIN
NLLSEVSYKRVLLKSATKVIEDRQVLIVEKKKALLQEITQMVYRLTNAINQRGKQLVVRL
NEVCDAKQKTLTEKKMALEQLSLVTDHCIDFVTNAVNKGSDMALLFSKRQITQHLQRIKS
KRADIPNPEIPVRIHLATDKVPDLIRVLSSIGNIVVDGRVYPSQHNNNNTSNQSGSNSAG
PVSNAPSASATSPATITQPQQHHQPPSLHGQPTANQAGYSTVPSYFPPGSSLRQSTSMGA
AGPPRAATPPQTQHLQSLQSLPAQVARNLNMLRHSPHNPQGLGLMRTHHQQVTSSTHPIA
DGRNVTLQAMLNPRAAPPGGPTPPLVQAPHQGQGRATLAMGPVGHPAQHPSGMPHTQRRY
QDPIVAQQQAAAQHHYQREYMRQQQQHQQQQQHQQQQQQHNLYGTYHPGPGTAGSAMWPG
QTGQRGGHQTQGVQQQGPHPPSQATAQVQAQAQAQAQAQAQAQAQAQAQAQALHQWHIPQ
HGVSQLGNLGRSGQGPNHQDNNSYKITLKTQVSPLQQQPQASSPGVPGASISVGPVPGAI
PINKQSLTSISVTREESRTPRLNDRSSSSSISSNHSNGERSISRQSSTSYMVSSSAPKTP
SPSLNKPEDAERSLDKYCEESVNDLMATIAKLDSNGIVVIPEPQPPAPMQLTQAGDSPQV
DSSTGDTRHQVVEKQEEVEPAKDDPNEDWCAVCMDGGELVCCDKCPKVFHMHCHIPTLEA
LPEDTWQCLLCTDINEVVSHFQDGKTQGTLSSNELKLARRLVLELYCQYEPSLQFRDIGS
GTEATSYNDQIDNPMCLETVRSKLSPDHSEHYSDLTEVIRDIRLIFKNAFANSSNDSQVY
GDAKTLEEFFEHLLTKWLPNFDFSKSNGDSEEEAMIDDIKQSNDSDQIPPAKRLKRGVVD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctttgagggccaaccagaagatgtgcttattgggaaacaggaacatcttgaa
aatagctcgaacggtacactaaatgatgataatgtagacggcttagaccaaagtaatcca
aatttgttggattcaaacaatcatgacgacgatggatctatgttacccacagactgtctc
aatggagaagtggaagcacctgcattggatggaatggaccaagatgctccaggaagtcca
acaactggagtggatgttccgggtgttaatacatggtcaaacataaaatgtgtttattgt
gaaacggttttaactctgaatgaccaacctagacttttagagtgtttacacacatcatgc
atgtcatgtataacatcgaagataaatgaacctaaccaagatactggagatgttgttgtg
gaagtcaatagtattggttgccctgaatgttctgtcaccagcattatcaatggcatcatt
gacaatcagtttttgctggaattgtgtatggagagtgaaatgggagccaatcctgactta
aacaagtctctctcagacttgaaatgttcaagctgtcaagatagtgcaccagctactagc
tggtgtgttgattgtgctgagttcatttgcgatgattgtgttcaggcccatcaaagatta
aagataacaaaagatcactcaataaaaccaaaggaagagggtgatttagagaaccataca
ttagcaagcacagcgacttcaaaaaatttctattgtaacattcatccacaggaacaactt
actttattttgtgaaacctgcgatagactgacatgccgagattgtcagttgactgaacat
cgagaccataaatataagttcagtcatgaaattgcctcagagtccagagggatgattaac
aatttgttatctgaagtgagctacaagagagttctcttaaagagtgctaccaaggtcatt
gaagataggcaagtactgattgtcgagaaaaagaaagcacttcttcaagaaataactcaa
atggtttatcgtctaacaaatgctatcaaccaaaggggaaaacaattagtagttcgtctt
aatgaggtttgtgatgccaaacagaagacgttgacagagaaaaaaatggcattggaacaa
ttatctttagtgacagaccactgcattgactttgtcacaaacgctgttaataagggtagt
gacatggctcttctctttagtaaaagacaaattactcagcatctccagagaatcaaaagc
aaaagggcagatattccaaacccagaaattcctgtcaggatacacttagcgactgacaaa
gttcctgacttaataagagtgctctcctctatcggcaatattgttgtggacggacgagtc
tatccgtcgcaacacaacaacaacaacactagtaatcaatctgggtccaacagtgctggg
cctgtatccaacgccccatccgcttccgccacctcccctgccactatcactcaaccccag
caacaccatcaaccaccatcactgcacggacaaccaactgctaaccaagcaggttactca
actgtgccgtcgtattttcccccgggctcctccctgcggcagtcaacatccatgggagcc
gcggggccgccgagagccgcaacgccgccgcaaacccaacaccttcagagcttgcagtcc
ttaccagcacaggtggctcggaacttgaacatgctgcgacattcacctcacaaccctcaa
ggccttggcctcatgcgaacacatcaccagcaggtgacgtcttctacacaccctatagcg
gacgggcgcaatgtaaccctgcaggcaatgctgaaccccagggctgcaccacctggtggc
ccaactcctcctcttgttcaagcccctcaccagggccaaggccgagctactctggcaatg
ggacctgtgggccatccggcgcagcacccttccgggatgccccatactcaacgacgctac
caggaccccatcgtggcccaacagcaggcggcggcgcagcaccactaccagagagaatac
atgcgacagcagcagcagcatcagcagcagcagcagcatcagcagcagcagcagcagcac
aatttgtatggaacgtaccaccctggcccggggacagctggctcggcaatgtggccgggg
caaacgggtcagcgtggaggtcatcagactcagggcgtgcaacagcagggtccgcacccc
ccatcccaggccacggcccaggttcaggcccaggcccaggcccaggctcaggcccaggcg
caggcccaggctcaagcgcaggcccaggcccaggccttacaccaatggcatattcctcag
cacggggtcagccagctcggcaatcttggtcgctctggccagggcccgaaccaccaggac
aacaattcttacaaaattaccctcaagacccaggtgtcacctctgcagcagcagccgcag
gcatcttcgccaggcgtaccaggagcctcgatcagcgttggcccagtgcctggggccatc
cccattaataagcaatctttgacaagtatatctgttacgagagaagaatcccgcacacct
cgtctaaatgaccggagctcctcctccagtatcagctccaaccacagtaatggagagcgc
agcattagcaggcagtcatccacaagctatatggtgtcatcttcagcaccaaaaactcca
agtccaagcttaaataaacctgaagatgcagaaagaagcttggacaaatattgcgaagaa
tctgttaatgatttgatggcaaccatagccaagctggacagcaatggtattgtagtaatt
ccagagcctcaaccgcctgcaccaatgcaattgactcaggctggtgatagcccacaagtg
gattcatctactggtgacaccaggcatcaagtggttgaaaaacaagaagaggttgagcct
gctaaagatgatccaaatgaggattggtgcgcagtgtgtatggatggtggggaattagtt
tgttgtgataagtgccccaaagtttttcatatgcactgtcacattcccacacttgaagct
ctgcctgaagatacatggcagtgtttactttgcactgacataaatgaagttgtaagtcat
ttccaagatggaaaaacccagggaactttaagctcaaatgaactaaagcttgcgcgtcgg
cttgttcttgagctatactgccaatatgaacctagtttgcaattccgagatattggctct
ggcactgaggcaacatcatataacgaccaaatagacaatccaatgtgtcttgaaactgtc
cgtagcaaacttagccctgatcattcagagcattattctgatttaactgaagttatacgt
gatattcgcctaatatttaagaatgcttttgccaacagcagtaatgacagccaagtgtat
ggtgatgcaaaaaccttagaagagttctttgaacatcttctgaccaagtggcttccaaac
tttgatttttccaaatctaatggtgattctgaagaggaagcaatgattgatgatattaaa
cagagtaatgatagtgatcaaataccccctgcaaagagactcaaaagaggtgtggtcgac
tga
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