Frankliniella occidentalis (western flower thrips): 113202439
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Entry
113202439 CDS
T07591
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113202439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113202439
03036 Chromosome and associated proteins [BR:
foc03036
]
113202439
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113202439
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113202439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
113202439
NCBI-ProteinID:
XP_026272438
UniProt:
A0A6J1RVQ5
LinkDB
All DBs
Position
Unknown
AA seq
1865 aa
AA seq
DB search
MFNPSKPFGQQQPPFSGFGSPQPAATPFGQIGTTFAKPATGFSAPAFGTPTGTSLFGQNA
QPATTGLFGAANKGTAFGQQPAQTGFGFQSAPTPGLFGSQQPAQTAAPATGGLFGASTSN
AFGQAKPAFGFRAPAAAPTLFGQPQTQQAQTTSVFGNTATQSSSMFSSLSGGFGGTTQQG
TTIKYQPTAGTDSILKHGHTQTVTTRHCCISTMKEYENKSLEELRYEDYLAGRKGPQKTG
GVFGAAQATPSPFGAPSTSTTAGGLFGSTTENKSLFGQPSASIGFGAQPTGFGTTAQTGT
LFGKPTAGFGTATTATTGFGFGNTTTPANPFGANTQAKPFGVAAPQTTNLFGAPTSQPST
GFGITPTTGFGSFASQPNQSIGLFNQNKPTFTLGSNNSAFNFGQNTATTAGTTLFGAKTT
APSFGAPTGFGAPATGTTAFSNSFGAPSTTQSTSLFTGAGFNKPASGFAFGPTPATSSTG
LGLNLGQSSLFGNTAQKPGGLFSGGSTFGAPTLGATSGFGGGGSLGTGLNLGGNTNLGAG
GGLGGAPTSQSSQLAQQQLLAMALVPFGDSPLFRNLLPSTGRANEMLQPTNPAAQKAVLN
ASAQYKVSPKGGPKIKVKVGYPALIKKSLCEGLEEDDGSTSQTFQVRPNPKRLNITPTIS
NNRSTVESTSVPQPSATHESEKENLSPLSPISQTTAESGTADWLRKSRDVAKPTSSNYGR
RSLNESALSHDDSVTNNTIHEFRMQQSSPASRKENEDQSISVVCVPSSSPRTEDKDANSN
KSSSSSDDSHDLEDSAPQLLDAESHPTGIICRRVGYYTIPSLEELTSYMSDDGSCIVDNF
TVGRDGYGNVFFEDKFDVADLNLDEIVHFRHKEVVIYPDDQSKPPIGQGLNRHAQVTLDR
VWPMDKTTHNPIMDPARLTQMDYEGKLRRVCARMDARFKEYRPQTGSWVFTVDHFSKYGL
TDSDEEDAPPGALAKAAALKAVASKGVPPKQSPLSKTAVVQGAVELKKLTSGFDTEMLDT
SPSQIAKKFASGYEADVMGETVTHITSPMGHLARESGTSARKVQLMKATFCMGGDEDDDV
DMCSYLDPPALPFSGLGGVGDGTEYSDGSEEEIACSAPVLSRHGLLRTQFALSEMSGQSM
RIDVSPAVSSLEASSNFQPRKSVGLIPAVEKVQLPVIVDEPKTVVLQFKGRIDPRVISGQ
CLADMSLMRGASFKVGWGLDSRFFSLEDDFQLLDASSKGHSLSIKMLSTEKPSVFQDSIE
GHLRIQLRFSVSGVQGCCPIRAPASGTDALLKHQQEAQKIADCDDDLLLNYHHQVWELCA
ALWGDLPELEIEGSTKDLNTHYTTMIRRKAVSKWLETVSKPLVEMETNRVFKSDAAQYPL
KEEYLEGILSLLSGRQILEACQKAQDYGDHYLAQLLCQLSGSAAVRKFMCEQLDSWEKSK
ADAFIDPRRLRLYLLVAGLANYETSEEYFVNTCHFLDWKRAFATHLWYICSPIASLADAL
KLYQEAFSASDEDSGNAYAKRPDPPYLDTLSDDCIVTVHGRKLNDLCYHLLQLYCDRSHP
LEQLLNPATHTDDPQDYRLSWTLMQVLNSIDYAHLSPLSQSIIHSGFASQLENNGLWHWA
IFVLLHLKDDYARKSSVLDMLGRHVELLEMRKLSEEEKFLHQELQIPIEWIYQAKAVRAS
CMHQYPDQVWYLLKASEWNEAHQVIMEHLAADAIINEHYVYLETLLKELEPVERSSTISG
WSNQGALLWDYLTVHKTVNELLDLVASNPDGFRDNDASYKLERIQPQLSRLCSRINNLPC
RNAKDRLCQCEIAKRACTLVRNVTQLQRGESAVWSMTLSNLIAQLPLPEDYTQQELQQLL
NAYMT
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatccatcaaaaccatttggtcagcagcagcccccattcagtggatttggaagc
cctcagcccgctgccactccttttggacagatcggcacaacatttgctaagcccgccact
ggtttcagtgcacctgcatttggcacacccacaggaacatcactttttggtcagaatgct
caaccagccacaactggtttgtttggtgctgccaacaaaggcacagcatttggtcaacaa
cctgctcaaacaggctttggatttcaatctgcaccgacccctggattatttggtagccaa
caacctgcacaaactgcagctcctgcaactggtgggctatttggtgcaagcacttccaat
gcttttggtcaagccaaacctgcctttgggttcagagctcctgctgctgctccaacattg
tttggacagcctcaaacacaacaggcacaaactacctcagtattcggcaatactgccaca
caaagctcgagcatgttttcatctctctcaggtggatttggaggtaccacacaacaaggc
accactatcaaatatcagcccacagctggaactgattcaattttgaaacatggccacact
caaactgtcaccacacggcactgttgtatatccactatgaaagaatatgaaaataaatcc
cttgaagaactgcgatatgaagattatttagcaggtcgtaagggcccacaaaaaacaggt
ggtgtatttggagctgctcaagctactccatctccatttggcgctccaagcacaagtaca
actgcgggcggtttgtttggtagtacaaccgaaaataagtcactatttggccaaccttct
gcatcaattggcttcggtgctcaaccaaccggttttgggaccactgctcaaactggaacc
ctctttggaaagcccacagctggatttggtacagctaccacagcaactactggcttcggc
ttcgggaacacaactactcctgcaaatccgtttggtgcaaatacccaggccaaacccttt
ggggttgcagctccccaaaccacaaatttatttggtgcgccaacttcccagcccagtaca
ggttttggtataactcctacaactggatttggtagttttgcatctcagccaaatcagagc
attggtctgtttaatcagaacaagcctacattcactttaggctccaataactcagccttc
aactttggacaaaacacggccaccactgctggtacaacactgtttggggctaagaccact
gcacccagtttcggggctcccactggatttggtgctccagcaacaggcacaactgccttc
tctaattcctttggagcaccctccaccacacagtccacctctctttttactggagctggt
ttcaataagcctgcctctgggtttgcatttggtcctactcctgccactagtagtacaggc
ttggggttgaatttaggtcagtcctcactttttggaaacactgctcaaaaaccaggaggc
ctgttctcaggtggttcaacatttggagcccccacccttggtgccacttcaggctttgga
ggtggtggttcccttggcactggcttgaaccttggtggaaacacaaatctcggagcaggt
ggtggtcttggtggagctccgaccagtcagagctctcaacttgctcagcaacagctcctt
gccatggctctcgtcccatttggtgattcacctttattccgaaatcttttgccttctact
ggccgtgccaatgaaatgcttcagcctaccaatcctgctgctcaaaaggctgtcctcaat
gcatcggcacaatataaagtctcacctaaaggaggacccaagatcaaggtgaaagttgga
tacccagctctcattaagaagtcattgtgtgaaggtttggaagaagatgatggaagtacc
agtcagactttccaagttcgtccaaatcctaagcgattgaatataactccaactatatca
aataatcgttctacagtggaatcaacatctgttcctcaaccaagtgctacccatgagtca
gaaaaagagaatctctctcctttgtcccccatctcccagaccactgcagagtcaggaaca
gcagactggcttcgtaaatctcgagatgttgcaaagcctacctcttccaattatgggagg
cgttcactaaatgaatctgccttaagtcatgatgattcagttaccaacaataccattcat
gaatttagaatgcaacaatcatcaccagctagtcgcaaagaaaatgaagaccagagcatc
tcagtggtatgcgttccatcatcaagcccgaggactgaggataaggatgctaacagcaac
aagagtagctcaagttcagatgatagccatgacttagaagactctgcccctcaacttctg
gatgcagaatctcacccaactggtattatttgtcgtcgagttggctattacaccatacca
tcccttgaagaattaaccagttacatgagtgatgatggaagttgcattgttgataatttc
actgttggtcgagatggatatggaaatgttttctttgaagacaagtttgatgttgcagat
ctaaacttggacgaaattgtccatttccgtcacaaagaagttgtcatttatcctgatgac
cagagcaaacctccaattgggcagggacttaatcgccatgcgcaggtcacattagatcgt
gtttggcctatggataaaaccactcacaaccctatcatggatccagctcgcttaacccag
atggattatgagggcaaactgcgccgagtctgcgctagaatggatgctagatttaaagaa
tatcgtcctcagactgggtcatgggtattcacagttgaccatttctctaaatatgggttg
acggattctgatgaagaggatgcacctcctggtgctctcgctaaagcagcagcactcaag
gctgtagcttctaaaggagttccacctaaacaatctccattgagcaaaaccgcagttgtt
caaggagctgttgaattgaagaaacttacttcggggtttgacacagaaatgcttgataca
tccccttctcagatcgccaagaagtttgcatcaggttatgaggcagatgtgatgggagaa
actgtcacccatatcacaagtccgatgggtcatctagcaagagaatcaggcacatctgca
cgtaaagtgcagttaatgaaagcaactttttgtatgggtggtgatgaagatgatgacgtt
gatatgtgctcttaccttgaccctcctgcattacccttcagtggcctgggtggcgtagga
gatggtacagaatacagtgatgggtcagaagaagaaatagcgtgttcagctcctgttctt
tcaaggcatggtcttctgcgcactcaatttgccctgtctgaaatgagtggacaaagtatg
cgcattgatgtatctccagctgtgtcatcattggaagccagttctaattttcagccaagg
aagagtgttggccttattcctgctgtagaaaaagttcaattgccagttattgttgacgaa
cctaaaactgtagtcttacaattcaaaggcagaattgacccccgtgtgataagtggacag
tgcctagctgatatgtctctaatgcgaggggcaagcttcaaagttggatggggcttagat
tccaggttctttagtcttgaagatgacttccagctattggatgctagttctaaaggccac
agtctcagcattaaaatgttgtctactgaaaaaccctctgtgtttcaagattcaattgaa
ggtcatttgagaattcagttaaggttcagtgtgagtggagtgcaaggctgttgccccatt
cgtgcacctgccagtggaacagatgctcttcttaagcaccaacaagaggctcagaaaata
gctgactgtgatgatgatctgcttcttaattatcatcatcaagtttgggaattatgtgca
gctttgtggggtgatctgcctgaattggaaattgaaggaagcactaaagatttgaacact
cattacacaacaatgatacgaaggaaagcagtctctaaatggctagaaactgtaagcaaa
ccacttgtggagatggaaacaaacagggtgttcaaaagtgatgcagctcaatacccacta
aaagaagaatatctggaaggtattttgtctctgctctctgggcggcagatattggaggct
tgtcagaaagcacaggactatggtgaccattacttggcacaacttctatgccaattgtct
ggaagtgcagctgtccgcaagtttatgtgtgagcagcttgattcttgggaaaagtctaaa
gcagatgcttttattgacccacggcgtctgcgtttgtatttacttgttgctggtttagcc
aactatgaaacaagtgaagaatattttgtcaacacctgtcatttcctggattggaagcga
gcctttgcaactcacctgtggtacatatgcagtcctattgcttcactggcagacgccctc
aaactgtaccaggaggctttcagtgcttctgacgaagatagtggcaacgcatatgctaag
agaccagatccaccataccttgacactctttccgatgattgcattgtaacagttcatgga
cgaaaactgaatgatctatgttatcaccttctacaattatactgtgatagatcccatccc
ttggaacaactattgaatccagccactcatactgatgacccacaggattatagactgagc
tggaccctaatgcaagttctgaacagcattgattatgctcacttgtcccctctctcacaa
tcaataatccattctggctttgcctcacaacttgaaaataatggactttggcattgggcc
atatttgttttattgcacctcaaagacgattatgctagaaagtcttctgtcctcgacatg
cttgggcgccatgtagagcttttagaaatgagaaaattgtcagaagaggagaaattttta
caccaagaactgcaaattcctattgagtggatttatcaagccaaggcagttcgtgcttca
tgcatgcatcagtacccagaccaagtttggtatctactgaaagcatcagaatggaatgaa
gctcaccaggtcattatggaacacttagctgcagatgctataattaatgagcattatgtg
tacctggaaacacttttgaaggagttagaacctgttgaaagaagtagtaccatatcgggt
tggtccaatcaaggagcactgttgtgggattatttgacagttcataagacagtcaatgaa
cttctagatttagtagcttcaaatccagacggctttagagataatgatgcaagctacaag
ctggaaaggatacagccccagcttagcaggctgtgttcaagaatcaataatttgccttgc
agaaatgccaaggataggctgtgtcaatgtgaaattgctaaacgagcgtgcacccttgtt
cgcaatgtcactcaattacagcgtggtgaatcagctgtttggtcaatgactctatccaat
cttattgcccaattgcctctcccagaagactacactcaacaagaattacaacaattgctg
aatgcatacatgacatag
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