Frankliniella occidentalis (western flower thrips): 113202786
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Entry
113202786 CDS
T07591
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04120
Ubiquitin mediated proteolysis
foc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113202786
04120 Ubiquitin mediated proteolysis
113202786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113202786
Enzymes [BR:
foc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113202786
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113202786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
zf-RING-like
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
113202786
NCBI-ProteinID:
XP_026272972
UniProt:
A0A6J1RVW9
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MRAASITFISLALTTAVVGNAFYNKKQFYPSVVYITKSNPSMAVIYIQALVVVVLIGKLM
QKVFFGQLRAAEFEHLADRSWYAVTETCLAFTLFRDDFAPRFVAQFILLLFLKAFHWLAE
DRVDFMERSPIISWLFHLRVISLMFVLSLLDLYFVNHAYLSTVSGGASAQIVFGFEYMIL
LMIVLNIAIKYVLHTIDLNSDNPWDNKAVFLLYTEVVMGMFKVVLYVTFLIIMVRIFTLP
LFLFRPMYYTLRSFRKAINDVILSRRAIRNMNTLYPDATPEELSAADNVCIICREEMHSA
SKKLPCNHIFHTSCLRSWFQRQQTCPTCRLNILRIPGDRNTGANQAANAEAQAQHAPDVP
PVPHPGLPNPFMNGVFPGMFPFWQQQFNQPPAGQPGQPGQPNSGGQQPPTGATGAATGTV
PGAQPGPIVMPVPPFPPMPPGFGLPFFCPPFPPAPPPFAVPPPMPPPGLATLSEEELRRL
ESAARDGVAARLQCLQNIQQLLDAAVLLMQQYSNAAAAASAATVTPVPSSPPSSSSAAPP
DSGVATTSTTVNSASPVVTSNATQNSARSEDRPTSVSPSSETPSSSRSKEDTGNSSDLTT
SVRSDGSGSSSSSINQTVTSALSPEQDEIRRRRLQKFTGIPEPMD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggctagcataacattcattagtctagcattaacgacagccgtcgtcggaaat
gcattctacaacaagaaacagttttacccgtcggtggtatatatcactaaatctaatccc
agtatggcggtgatatacatacaagctcttgtggttgtagttcttattggcaagctcatg
cagaaagtattctttggtcaactgagagcagctgaatttgagcatttagctgatcgctca
tggtatgctgtgacagaaacatgtctggcctttactcttttccgagacgactttgcccca
agatttgtagctcaatttattttactgctctttctgaaagcattccattggcttgcggag
gaccgtgttgattttatggagagaagtcctatcatatcatggttattccatttgagggtc
atctcattaatgtttgtccttagtctccttgatttatactttgtgaatcatgcatatctc
tcaacggtctcgggaggggctagtgctcagatagtgtttggttttgagtacatgattctt
cttatgatagtgctaaatatagcaataaaatatgttctacacactattgaccttaattct
gacaacccatgggacaacaaggctgttttcctgttgtatacagaagttgtaatgggaatg
tttaaggttgtactttatgtcacattccttataataatggtgcgcatttttacattgccc
ttgttcttattcagaccaatgtattatactttgaggtccttcagaaaggcaataaatgat
gtaattttgtcgcgtagagctatacgcaacatgaatactctttatcctgatgcaactcca
gaagagctgtctgctgctgataatgtgtgcatcatatgtagagaggaaatgcattcagct
tccaagaaactaccttgcaaccatatatttcacacatcctgccttcgttcttggttccaa
cggcaacaaacatgtccaacatgtcgtctcaatatcttgcgcataccaggtgacagaaac
actggtgctaatcaagcagcaaatgcagaggctcaagcacaacatgctcctgacgtccct
cctgttccacacccaggtcttccaaacccatttatgaatggcgttttcccaggcatgttt
ccattttggcagcaacagtttaatcaacctccagctggtcaacctggtcagccaggccaa
cccaattcaggtggccagcaaccccctactggggcaactggagccgctaccggcactgtt
cccggggcacagccaggccctattgtgatgcctgttccaccatttccacctatgcctcca
ggctttggattgccattcttttgccctccttttcctccggcaccacctccatttgctgtg
ccaccacccatgccaccaccaggcttggcaactttaagtgaagaggagttgcgcagacta
gagagtgccgctcgagacggagtagcagctcgtctgcagtgcttgcagaacattcagcaa
ttactggatgcagctgttttgctaatgcagcagtactccaatgcagctgcggctgcttct
gctgcaactgtaacaccagtaccatcatcaccaccttctagttcatccgccgcaccccca
gactcaggagtggctaccacatccaccactgttaattctgcttcaccagtggtgacctca
aatgcaactcaaaatagtgctcgttctgaagatagacccaccagcgtttctccctcttct
gaaactccaagcagcagtagatcaaaggaggatacaggaaattcgtctgacctgacaacc
tcagtaaggtctgatggttcaggtagctcttcctctagcattaaccaaacagtcacttca
gcactatcacctgagcaagatgaaattagaaggcgacggctacagaaattcaccggaatc
ccagagccaatggactga
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