KEGG   Frankliniella occidentalis (western flower thrips): 113202914
Entry
113202914         CDS       T07591                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03018  RNA degradation
foc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113202914
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113202914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:foc03019]
    113202914
   03041 Spliceosome [BR:foc03041]
    113202914
Messenger RNA biogenesis [BR:foc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113202914
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113202914
Spliceosome [BR:foc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113202914
 Complex C
  U2 snRNP components
    113202914
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-GeneID: 113202914
NCBI-ProteinID: XP_026273146
UniProt: A0A6J1S2V5
LinkDB
Position
Unknown
AA seq 95 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAAVPTR
NT seq 288 nt   +upstreamnt  +downstreamnt
atgttgttttactcattctttaaatcccttgttgggaaagatgttgtggtcgaattaaag
aatgatttaagtatttgtggtaccctacattctgtcgaccagtacctgaatatcaaactt
acggatatcagtgttacagaccctgataaatatcctcatatgctgtcagtgaagaattgt
ttcattcgtggctctgtggtccgatatgttcaattacctgctgatgaagtagatactcaa
ctcttacaagatgcagctcggaaagaggcagcagtgccaactcgataa

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