Frankliniella occidentalis (western flower thrips): 113203120
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Entry
113203120 CDS
T07591
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113203120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113203120
03036 Chromosome and associated proteins [BR:
foc03036
]
113203120
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113203120
Coactivators
SAGA/TFTC/STAGA complex
113203120
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113203120
STAGA complex
113203120
TFTC complex
113203120
SAGA complex
113203120
SLIK complex
113203120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_TEP1_C
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR41
WD40_RFWD3
ASA1
CFAP251_N
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
PAC11
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_HPS5
PROPPIN
LRRC43_C
Beta-prop_NWD2_C
Nucleoporin_N
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
113203120
NCBI-ProteinID:
XP_052126068
UniProt:
A0A9C6UC07
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MNKKKPKTDATCKRSKNEVVRAALGSYLKRRNYTISETFRHAEGDSALSHVQDTNPRMEV
PMSLSREQMALTTAIENDATRNNSILYSCINSDSSQVDQQFNKFKTWVNDLAAVDCRVEL
SCLIIPLFCHMYLEMLQGGNRQLAPKFLKRYQHTLISENCTVGRVTEVLEELSYITCTQD
INTRPIVKAFRSCKYQCQLSAKSLASLKKYLAVQGHVVLFQALQTWFDLEIPSTSTDLSR
LEEDDDDKTEFTDKKDLRNDENTDKSSKEFPITEGPVDLEEGLRQLQEAVRLLEEEPITA
TPLLLYTIVNTDCNITCARLSQSQRVLVAGCVTSEVRVYPIPGSRSLGYECPIINNPTAH
INLACDEVLPPRKIQRIGFEDSNYESLRGHSDAVHDVAFVPEANTVISVSADCTMRAWDM
QDFSNAAIYRGHNYPIYSVDVSAWSVYLATASHDRTARLWSLDRTFCLRIFAGHQQEVNV
VKFHPNGSYLATASADKTVRLWSIVDGKMVRVFPGHKGSVHALAFSENGKFIASAGDDKR
IKVWDLAEGTVIADLKGHTDPVVGLQWIPGCDGIASFSTDTVVRTWGLNSTLGTEAYTTD
ILECDTGCSSLLNLQYSHRNSISCIGCL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaagaagcccaagacagatgctacctgtaaacgttccaaaaatgaagttgta
agagcggcgttagggtcctatctgaagcgtcggaattacactatatcagagaccttcaga
catgcagagggagattctgcattgtctcacgttcaggacactaatcctagaatggaagtt
ccaatgtcacttagtagagaacagatggcactcacaactgcaatagaaaatgatgccact
agaaataactccattttatatagttgcattaacagtgattcatcccaagtagaccaacag
ttcaataaattcaagacgtgggtcaatgacttggcagcagttgattgtcgagttgagctg
tcttgtttgatcattcctttattttgtcatatgtatctagaaatgttgcaaggagggaat
cgacaactagcacccaaatttctaaaacgctaccagcacacattaatttctgaaaattgt
actgttggtagggtaactgaagttcttgaagaactttcttacattacatgtacccaggac
atcaatacaagaccaattgtgaaggcttttagatcatgtaaatatcaatgtcaactatca
gcaaaaagtttggcaagtttaaaaaagtatttagctgtacaaggccatgtggtattattt
caagctcttcagacatggtttgatcttgagataccatcaacatcaactgacctgtctaga
ttagaagaagatgatgatgacaagactgaatttactgacaaaaaggatctgaggaatgat
gaaaatactgacaaaagtagtaaagaatttcctataacagaagggccagttgatctggaa
gaagggttacggcaattgcaagaggctgtacggctgttagaagaagagcctattacagca
actcctcttttattgtacaccatagtaaatacggattgcaatattacatgtgcaagactc
agtcagtcccagagagtgttggttgctgggtgtgttacatcagaagtgagagtctatccc
attcctggtagccgtagccttgggtatgagtgtcccattattaacaatccaactgcccat
atcaatcttgcctgtgatgaagttttacctcctcgaaaaattcaacgaattggctttgaa
gactcaaattatgaatctcttcggggacacagtgatgctgtacatgacgttgcctttgtg
ccagaggccaacactgtcatatcagtctctgctgattgcactatgagagcgtgggacatg
caagacttctctaatgctgcaatttacagagggcacaattacccaatctatagtgtggat
gtaagtgcttggagtgtgtacttagcaacagcctcacatgaccgtactgcccgtctctgg
tctctagataggactttttgcctaagaatttttgctggtcatcagcaagaagttaatgtt
gtcaagtttcatcctaatgggagttacttagccactgcttcagcagacaagactgttaga
ttatggtccatcgtggatggaaaaatggtcagagtattcccaggacataaaggaagtgta
catgctttagcatttagtgaaaatggaaagtttatagcttcagcaggggatgacaagcgt
atcaaggtttgggatctggctgaaggcactgtaatcgcggacctcaaaggtcatacagat
ccagttgttggattgcaatggatcccaggttgtgatggtattgcctcttttagtaccgac
actgtggtgcggacttgggggttaaatagcaccctagggactgaagcatacaccacagat
attcttgagtgtgacacaggctgctccagtttactgaaccttcaatacagtcatcgcaac
agtatctcatgcatagggtgcctttga
DBGET
integrated database retrieval system
