Frankliniella occidentalis (western flower thrips): 113203249
Help
Entry
113203249 CDS
T07591
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
foc03015
mRNA surveillance pathway
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113203249
09122 Translation
03013 Nucleocytoplasmic transport
113203249
03015 mRNA surveillance pathway
113203249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113203249
03041 Spliceosome [BR:
foc03041
]
113203249
03009 Ribosome biogenesis [BR:
foc03009
]
113203249
03012 Translation factors [BR:
foc03012
]
113203249
Enzymes [BR:
foc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113203249
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113203249
mRNA cycle factors
Stress granule specific factors
113203249
Spliceosome [BR:
foc03041
]
Complex C
Other components
EJC/TREX
113203249
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
Helicases
113203249
Translation factors [BR:
foc03012
]
Eukaryotic type
Initiation factors
eIF-4
113203249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
113203249
NCBI-ProteinID:
XP_026273619
UniProt:
A0A6J1RXC4
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAEGQRTRRVLPNEDLSNVEFETSEDVEVLPSFDSMELREDLLRGIYAYGFEKPSAIQQR
SIRPIIKGRDVIAQAQSGTGKTATFSISILQSLDISVREVQVLCLSPTRELAVQIQKVIL
ALGDYMNVHCHACIGGTNLGEDIRKLDYGVHVVSGTPGRVFDMIRRRSLRTRSIKLLVLD
EADEMLNKGFKEQIYDVYRFLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSM
HGDMPQKERDVIMKEFRSGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggacagagaacacggcgtgttttgccgaacgaagacttgtcaaatgttgaa
tttgaaactagcgaagatgtcgaagttttgccatccttcgattctatggaactgcgagaa
gatctgctgcgggggatctacgcttatggttttgaaaaaccctccgctattcagcagagg
tccattaggcccattatcaaagggcgggatgtgattgcccaagctcagtctggtacagga
aaaacagctacattctcaatttctattcttcaaagtcttgatatttctgtgcgagaagtt
caagttctttgtctttcaccaactcgtgaattggcagtccagattcagaaggtcattctg
gctcttggagactacatgaatgttcactgccatgcatgtattggtggtaccaatcttggt
gaagacattaggaagctggattacggagtacatgtggtctctggtacaccaggaagagtt
tttgatatgatccgaagaagaagtttgaggacaagatcaataaaactgttggtacttgat
gaagctgacgagatgttgaacaaaggtttcaaagaacagatttatgatgtatatcgcttc
ttgccacccgccactcaggttgtgctgatatctgctacactacctcatgaaattcttgag
atgacaagtaaattcatgactgacccaatcagaattttggtcaaacgtgatgaactgaca
cttgaaggaatcaagcagttctttgttgctgtagagcgtgaggagtggaagtttgacaca
ctgtgtgatctttatgatactctcacaatcactcaggctgtaattttctgtaacaccaag
cgaaaggtggattggctcacggagaaaatgagagaagctaattttacagttagttctatg
catggagacatgccacagaaggaacgagatgtcatcatgaaagagttccgctcgggtgct
agccgagtcctgattaccactgatgtttgggcccgtggtattgatgttcagcaagtctct
cttgtcatcaactatgatttgcctaacaatcgtgagttgtacattcacagaattggtcga
tcaggacgtttcggaaggaagggtgttgctatcaactttgtcaagagtgatgacattaga
attctgcgagatattgaacagtattactccacgcagattgatgaaatgcctatgaatgtt
gctgatttgatttag
DBGET
integrated database retrieval system
