Frankliniella occidentalis (western flower thrips): 113203272
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Entry
113203272 CDS
T07591
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113203272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
foc03041
]
113203272
Spliceosome [BR:
foc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113203272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
PRP4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_like
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
HrpB7
Motif
Other DBs
NCBI-GeneID:
113203272
NCBI-ProteinID:
XP_026273647
UniProt:
A0A6J1RXY4
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSDDEDIQYVKKTKTIHYASLEEQERTRQATEMAREDSDDDDSDKEGQSMDFGNINTHDE
YFDLEEEMSKDKQALLEEFERRKKARQINVPTDDGEVKKNLRQLGEPICLFGEGPAERRS
RLRDWLSRLGDDAIKRKQEQEEERIQQEKDQESTWYHEGPESLKVSRLWLAQYSLVRARE
RLEAAREELKLPEATRTAHRQEVHKRLQAVSIFASQIGDTRPISYCQFSPNSKMLATGSW
SGMCKIWSIPECEQIHTLRGHQCNVGAVIFHPNATQDNANQAVCALASCAADGSVKLWTL
ESEEPLADVEGHAPHRVSRIGFHPSGRFLGTCCFDNSWRLWDLEQCSEVLHQEGHTKPVY
CLSFQRDGSVAATGGLDAFGRVWDLRTGRCIMFMEGHLKAIYGVDFSPDGYHIATGSEDN
TCRIWDLRKRQCIYTIPAHTNLVSDVKYQRENGTFLVSASYDNTAKVWSNKTFQPVKTLS
GHDGKVMCVDVSPDTQYIATCSYDRTFKLWAPE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaggacattcagtatgtcaaaaagactaaaaccattcactatgcatcc
ttggaggaacaagagcggacaaggcaagctacagagatggccagagaagacagtgacgat
gatgactctgacaaggaagggcagtccatggactttggaaatattaacacacatgatgaa
tactttgacttggaggaggaaatgtccaaagacaaacaagcacttttagaggaatttgaa
aggcgtaagaaggcacgccaaattaatgttccaacagacgatggagaagttaaaaagaat
ttaagacagttaggagaaccaatatgtttgtttggagagggccctgcagaacggagaagt
cgcttgagagattggctctccagacttggagatgatgcaattaagagaaaacaagaacag
gaagaggaacgaattcagcaagaaaaagatcaggaatcaacatggtatcatgaaggtcct
gagtcattgaaggtttctcgtttgtggcttgctcagtattcattagttcgtgctcgagag
cgtctggaggcagctcgtgaagaactgaagctcccagaagctacaaggactgctcatcgt
caagaggttcacaagaggcttcaagcagtgtctatttttgcctcacagattggagacacc
agacctatctcctattgtcaattcagtcctaactcaaaaatgcttgctactggatcttgg
agtggtatgtgcaagatttggtctataccagaatgtgaacaaattcacacactcagaggt
catcagtgcaatgttggagcagtcatttttcatccaaatgctactcaagacaatgcaaat
caggctgtttgtgctcttgcatcatgtgctgctgatggttcagtgaaactgtggacgtta
gaaagtgaagagccgcttgctgatgtagagggccatgctccacatagagtttcacgaatt
ggattccatccctcagggcggttcttaggaacgtgttgttttgacaactcatggaggttg
tgggatcttgaacagtgctctgaagttctgcaccaagaaggccacacaaagcctgtgtat
tgtttatcttttcagagagatggatcagtggctgcaacaggtggacttgatgcatttgga
agagtgtgggaccttcggactggacgttgcatcatgtttatggaagggcaccttaaagca
atttatggtgttgatttttctcctgatggttatcacattgctactggcagtgaagataat
acatgccgtatttgggaccttcgcaaacgccagtgtatatatacaattcctgctcacact
aatctagtatctgatgtcaaataccagagggagaatggcacatttttggtctctgcatct
tatgacaatactgccaaggtttggtctaataagacattccagcctgtaaagaccctctca
ggacatgatggtaaagtaatgtgtgtagatgtatcacctgacactcagtatatagctact
tgttcgtatgacaggactttcaaattgtgggcacctgaataa
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