Frankliniella occidentalis (western flower thrips): 113203346
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Entry
113203346 CDS
T07591
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
foc03000
]
113203346
03021 Transcription machinery [BR:
foc03021
]
113203346
Transcription factors [BR:
foc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113203346
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
113203346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
113203346
NCBI-ProteinID:
XP_052127254
UniProt:
A0A9C6X186
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MPRLMPAGMLAWAAEHAVAVGSPIAGLHKSLSRLPRTAPSPSPAASPAPSWPEDLAATPG
SPNAFLEALKACSARPAATADDQPLDFSVHGSPPPPRAANGMASTASSALLLQQRLAGLA
GPDHRSTTPSTPKAATPADPAEDGGSGRASPAGGPGDRSRSREDGEAGLSALGDLRRSPG
PLWRRRGSIQDGGGGGNSNNSGGELGGGAQDASPVSDQDSGVRRRQEDQDDDKDTEDLAP
PSWHTPTETGPAGRGDSASPLSRTHRDRGVGDDDDRGRSSPSEQLHQLPHHRFLEQRLAS
QLADRLQDRHPDDDRDGGEDSDSEGSVTPGPTPPAALNLFLSALGAQNPQMRLQSQLAAA
ASAVAAGHLPGQLSPQLLSQLQQQLQQQQIQQYLFLQNAAAGRPNYFMHNQALLGSQGTP
AFPGRGPPSGPGAPRAPPVGLRAGPSASPGGPGGAHHLARTSLGGQIHQSSAQSGQQRQQ
PQDRRPHKASALGRSVNNSGGGVVNMPHLPGMGAGLPDGAGGGGGGGGGGGGGPKGGSGT
PRALAEPSPEESVELEELEQFAKAFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFE
ALNLSFKNMCKLKPLLQKWLEDADNSFSNPNSLSSPLSTPEAIGRRRKKRTSIETTTRVA
LERGFLQNPKPTSEEISILADNLGMEKEVVRVWFCNSRWASRVAGDRRKSASTRQPTRPW
AGAPRPPSGAHHPPPPPPTLCSAGVGPSGLGPSLWSPRPGPSAAHLGAPTAHPWAPATAH
PLAPSAHHRPWGGPALALGPAGLGPGLLQGPPPATPRRGMGPAMGQAGLHLQPEATALSG
AVLQELAHPGASPSTASSTASSDAQPHPSQPAWGPQGPRSP
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctcatgcccgccgggatgctggcgtgggcggctgagcacgccgtcgcggtg
ggctcgcccatcgccggcctgcacaagagcctgtcgcggctgcccaggacggcgccgagc
cccagcccggccgcaagccccgcgccgagctggcccgaggacctggccgccacccccggg
agccccaacgccttcctcgaggcgctcaaggcgtgctcggcgcggcccgccgccaccgcc
gacgaccagcccctcgacttctcggtgcacggctcgccgcccccgccacgcgccgccaac
ggcatggcgtcgacggcgtcctcggcgctgctcctgcagcagcggctggcggggctggcc
gggccggaccaccgctccaccaccccgtcgacgcccaaggccgcgacccccgcggacccc
gccgaggacggcgggtccgggcgggcctcgccggcgggcggccccggggacaggtccagg
agccgcgaggacggtgaagctgggctgtcggctctcggggacctgcggcgcagtcctggt
cccctgtggcgacgtcgcggttcgatccaggacggcggcggtggcggcaacagcaacaac
agcggaggggagcttggcggtggcgcccaggacgcgtcgcccgtctcggaccaggactcc
ggcgtcaggcggcgccaggaggaccaggatgacgacaaggacaccgaggacctggccccg
ccctcgtggcacacgcccaccgagacaggtcccgctggccgcggggacagcgccagcccc
ctgtcgaggacgcaccgggatcgcggggtcggcgacgacgatgaccgggggaggtcgtcg
ccgtcggagcagctccaccagctcccccatcaccggttcctcgagcagcggcttgcgagc
cagctggcggaccgcctccaggacaggcatcccgacgacgaccgggacggcggcgaggac
tcggacagcgagggctcggtgacgccgggcccgactccccccgccgccctcaacctgttc
ctgagcgccctgggcgcgcagaatccccagatgcggttgcagagccagctcgcggctgcg
gccagcgccgtggcggcgggccacctccccgggcagctttctccgcagctgctgtcgcag
ctccagcagcagctgcagcagcagcagattcagcagtacctgttcctgcagaacgccgcc
gccggcagacccaactactttatgcacaatcaggctctactgggctcgcaggggacgccg
gccttccctgggcgagggcctccgagcggccccggcgccccccgcgctccccccgtgggg
ctcagggcaggcccgtccgccagccccggcggccccgggggcgcgcaccacctggccagg
acctcgctgggcggacagatccaccagtcctcggcgcagtccggacagcagcggcagcag
ccccaggaccggcggccgcacaaggcgtccgccctgggccgcagcgtgaacaacagcggc
ggcggcgtggtgaacatgccgcacctcccggggatgggggccggcctcccggacggcgct
ggtggcggcggcggcggaggcggcggtggcggtggtggtcccaaaggcggctcggggacg
cctcgtgccctggccgagccgtcgccggaggagtcggtggagctggaggaactggagcag
ttcgccaaagccttcaagcagcgtcgaatcaagctgggcttcacgcagggtgacgtcggc
ctggccatgggcaagctctacggcaacgacttctcccagacgaccatctcgcggttcgag
gcgctcaacctgtcgttcaagaacatgtgcaagctcaagccgctgctgcagaagtggctc
gaggacgcggacaactcgttcagcaaccccaactcgctgagcagcccgctctcgaccccg
gaggccatcgggcggcggcggaagaagcggacgtccatcgagacgacgacgcgcgtcgcc
ctggagcgcggcttcctgcagaaccccaagcccacgtctgaggagatctcaatcctggcc
gacaacctgggcatggagaaggaggtggtgcgggtgtggttctgtaacagccggtgggca
tctcgtgttgcaggcgacagaaggaaaagcgcatcaacccgccagccaactcgtccttgg
gcgggagccccccgccctccctcgggggcccaccatcccccaccaccacccccaaccctc
tgttcagcgggggtgggcccctcggggttgggcccctctctctggtcgcccaggcccggc
ccttcggcagcccacctcggggcgcccacagcccacccatgggcgcctgctacagcccac
cctctggcaccttcagcccaccaccggccctggggggggccggccttggccctgggcccg
gcgggcctgggcccgggcctgctgcaggggcccccgccggctactccccgccgcggcatg
ggcccggccatgggccaggcgggcctccatctccagccagaagctacagccctctccggt
gcagtccttcaagaactggctcacccgggagcatcccccagcacggcctccagcacggcc
tccagtgacgctcagccccaccccagccagccggcgtgggggccacaaggaccgcggtct
ccgtga
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