Frankliniella occidentalis (western flower thrips): 113203498
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Entry
113203498 CDS
T07591
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03420
Nucleotide excision repair
foc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113203498
09124 Replication and repair
03420 Nucleotide excision repair
113203498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113203498
03400 DNA repair and recombination proteins [BR:
foc03400
]
113203498
Ubiquitin system [BR:
foc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
113203498
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113203498
TCR (transcription coupled repair) factors
Cul4-CSA complex
113203498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
113203498
NCBI-ProteinID:
XP_026274009
UniProt:
A0A6J1RYI6
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MAHHYVVTAHKPTAVTACVTGNFTSPDDLNLILAKNTRLEIYLVTPEGLRPLKEVGLYGK
VAVMKFFRPPHEKKDLLFIVTKRYNAMILECHGDIENLEIITKAHGNVADRIGKPSETGI
IAVIDPEARVIGLRLYDGLLKIIPLDRDNSELKASSIRMEELSVQDLAFLHGCQNPTIIL
IHQDLHGRHIKTHEISLRDKEFVKIPWKQDNVETEAAMVIPVPEPLGGAIIIGQELILYH
NGNTSVAVAPPIIKQSTIVCYAQVDSNGSRYLLGDMAGRLFMLLLEKEEKMDGTFTVKDP
KVELLGEISIPEAITYLDNGVLFIGSRIGDSQLIKLNKTPDENGSYVSVMETFTNLAPIV
DMVVVDLERQGQGQLVTCSGSFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALRTNSNSR
FDNTLILSFVGQTRVLTLTGEEVEETEIPGFLSDQQSFYCGNVDHDQIIQVTPSSARLLS
MSTKQLVSEWKQPSEKSISVVACNPSQVICATGSDLYYLEILEGELVQKGHVTLEHEVAC
LDITPLQEGATSAQLVAVGLWTDITARILRLPNLEEVNRESLGGEIIPRSILMTCFEGSN
YLLCALGDGAMFYFSLSKTGILTEKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRSVPLGESP
RRIAYQESSQTFGVISMRMDVQDSGGVQPARPSASTQTQSTSVSSSLFKTASVGAVNLST
DHGQEVEIHNLLIIDQHTFEVLHAHQFMQTEYALSLLSCKLGDDPTTYYIVGTAYINPEE
SEPKFGRILIFQYQDNKLTQVHEKDIKGACFSLVEFNGKLLTSINSTVRLFEWTTEKELR
LECTHFNNIIALYLKTKGDFLLVGDLMRSMTLLQYKTMEGSFEEIARDYNPNWMTAIEIL
DDDTFLGAENFANLFVCQKDSAATTDEERQQMQAVGQFHLGDMVNVFRHGSLVMQHVGET
STPTQGCVLFGTVSGAIGLVTQIPADFYEFLHEVEERLSQVIKSVGKIEHNFWRSFNTEI
KTEPCEGFIDGDLVESFLDLTQDKMKEVVTGVQIDNGSGMKQDATVEDLVKTVEDLTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccactatgtcgttacggcacacaagccaacagcagtcactgcatgtgtgacc
ggaaactttacatcacctgatgacttaaatctgattcttgctaaaaacacaagattagaa
atatatcttgtgacaccagaaggcttgcggcctttgaaagaagttggtctctatggaaaa
gtggctgtaatgaaatttttcagaccacctcatgaaaaaaaagatttactattcattgtc
actaaacgatacaatgcaatgattctggagtgtcatggagacattgaaaacctagaaatt
ataacaaaagctcatggtaatgtagctgaccgcatcggcaagccctcagaaactggaatc
atagcagtcattgacccagaagcccgtgttattggtctgagactctatgatggtctgttg
aagattattcctctagaccgggataatagtgaattgaaagcatcttcaattagaatggaa
gagctaagtgtacaagatttggcttttcttcatggctgccaaaaccccactatcattcta
attcaccaagatcttcatggtagacatattaaaacccatgaaatttcattaagggataag
gaatttgtaaagattccatggaagcaagacaatgttgaaacagaagcagccatggttatt
ccagttcctgagcctctgggtggtgctataattatagggcaagaattaattctctatcac
aatggtaatacttccgttgctgttgcacctccaatcatcaagcaaagtacaattgtttgt
tatgctcaagtggattctaatggatccagatacttactgggtgatatggctggaagactg
tttatgctgctacttgaaaaagaagagaaaatggatggaacttttactgtaaaagacccc
aaggttgagcttctaggtgaaatcagtattcccgaggcaatcacatacctggataatggg
gtgctttttattggatctcgtattggggattctcaacttattaaacttaacaaaactccg
gatgaaaatggttcttatgttagtgtgatggaaacattcacaaacctagcacccattgtt
gatatggttgttgttgacctggaaaggcaaggtcaaggtcagcttgttacttgttcaggc
tcattcaaggagggatctttgagaatcatcagaaatggaattggcatccaagaacatgca
tctattgatttacccggaattaaaggcatgtgggcattaagaacaaactccaacagccgc
tttgacaataccctaattttgtcgtttgtggggcaaactcgggttttaactttaactgga
gaagaagtggaagaaactgaaattcccggattcttgtctgatcagcaatcattttactgt
ggaaatgttgatcatgaccaaataatccaggtgacaccatcttcagcacgtttgctttcc
atgtcaaccaaacagcttgtcagcgagtggaagcagccttcagaaaagagtattagtgtt
gtggcatgcaatccatctcaagttatttgtgcaaccggaagtgacttgtactaccttgaa
atacttgaaggagaactagttcaaaaagggcatgttacattagagcatgaagtggcttgt
ttggatataactccactgcaggaaggtgcaacatcggcacaattagtggcagtgggtttg
tggactgacattacagctcgcattctccgtttgccaaatttagaggaagttaaccgtgaa
agtctaggtggagaaatcataccaagatcaattctcatgacgtgctttgagggcagcaac
tatttgctgtgtgcgttgggtgatggcgctatgttctacttttctcttagtaagactggg
atattgactgagaaaaagaaggtgactcttggtacccaaccaactgtgcttcgaaccttc
cgctcactctctacaacaaatgtttttgcttgctctgatagaccaactgtaatttattct
tccaatcataaattggttttttctaatgttaatcttaaggaggtgaatcatatgtgctct
ctcaatgctgaatcctacccagacagcttggctctggcaacagacagcacagttaccatc
ggaactattgatgaaattcagaaacttcatattcgatctgtgcctttgggtgaatctccc
cggagaatagcatatcaagaaagctcacaaacttttggtgtgatttcaatgaggatggat
gttcaagacagtggtggagtgcagccagctcggccaagtgcttccactcaaactcagagc
acttctgttagctcatcgctttttaaaactgcttcagttggtgctgttaacttatcaaca
gaccatggtcaagaagttgagatacacaatcttttgattattgatcaacatacgtttgag
gtccttcatgctcaccagtttatgcaaacagaatatgcactttctttactgtcctgcaag
ttgggagatgatccaacaacttactatattgttggaacagcctatataaatccagaagaa
agtgaaccaaagtttggtaggattcttatattccagtaccaagacaacaagttgactcag
gttcatgagaaagatataaaaggagcttgcttttcattagttgagtttaatgggaagtta
cttacaagcatcaatagcactgttcgtttgtttgaatggacaacagagaaagagcttaga
ttggaatgtactcatttcaacaatattattgctttgtatcttaaaaccaaaggtgacttt
cttctagtaggtgatctcatgcgatcaatgacacttctacagtataaaacaatggaaggc
agctttgaagagattgcaagagattacaacccaaattggatgaccgcaattgagatactg
gatgatgacacatttttgggtgcagaaaactttgcaaacttatttgtgtgccagaaagac
agtgctgctaccactgatgaagagcgacagcaaatgcaagctgttggccaatttcacttg
ggagacatggtcaatgttttcagacatggctcactggtcatgcagcacgttggtgaaacg
tcaactccaactcaaggttgcgtgctttttggcacagtcagtggagctataggcttagta
acacaaattcctgctgatttttatgaatttctccacgaagttgaagaaaggctctcccaa
gtcattaaatccgtgggtaaaattgagcataacttttggcgcagcttcaacacagaaatt
aaaactgaaccttgtgaaggtttcattgatggagacttggttgagagtttccttgattta
actcaagataaaatgaaggaggtggtcactggagttcagattgacaatggatctggaatg
aagcaagatgcaactgtggaagacttggtcaaaactgttgaagatttaacaaggatacac
tag
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integrated database retrieval system
