Frankliniella occidentalis (western flower thrips): 113203698
Help
Entry
113203698 CDS
T07591
Name
(RefSeq) histone deacetylase HDAC1 isoform X2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03082
ATP-dependent chromatin remodeling
foc03083
Polycomb repressive complex
foc04213
Longevity regulating pathway - multiple species
foc04330
Notch signaling pathway
foc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113203698
03083 Polycomb repressive complex
113203698
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113203698
04350 TGF-beta signaling pathway
113203698
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
113203698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
foc03036
]
113203698
Enzymes [BR:
foc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113203698
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
113203698
HDAC complexes
Sin3A-HDAC complex
113203698
BRAF-HDAC complex
113203698
REST complex
113203698
SHIP complex
113203698
MiDAC complex
113203698
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
113203698
Heterochromatin formation proteins
Other heterochromatin formation proteins
113203698
Chromatin remodeling factors
NuRD complex
113203698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
113203698
NCBI-ProteinID:
XP_026274324
UniProt:
A0A6J1RZI2
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MQAHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAE
EMTKFHSDEYVRFLRSIRPDNMSDYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFV
PIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYGMPFLMVGGGG
YTIRNVSRCWTYETSVALGTEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLEKI
KTRLFENLRMLPHAPGVQVQAIPEDAVREESDDDDKANPDERLTQAALDKRIVPDNEFSD
SEDEGEGGRRNDRSFKGRKRPRLDTKTPADANEEKLKSEGDGAKPEGKTEEKDEKVASSD
DAKKDAAPNP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccacagcaaaaagcgcgtttgctactactacgacagtgatataggtaattac
tactatggacaaggacatccgatgaaaccacacagaatacgcatgacacacaatcttctc
ttgaactatgggttgtacaggaagatggaaatttatagaccacacaaggcaactgccgaa
gaaatgaccaaattccatagtgatgaatatgtaagatttttacggagcatcagaccagat
aatatgtctgactacaacaaacaaatgcagagatttaatgttggagaggattgccctgta
ttcgatgggttgtatgagttttgccaattgtctgctggtggttcagtcgcagcagcagtc
aaattgaacaaacaagcttctgaaatctgtatcaattggggaggtggacttcatcatgcc
aaaaagagtgaagcctcaggattctgttatgtaaatgacatagttttgggcattttggaa
ctgctgaagtaccatcaacgagttttgtacattgatattgatgtgcatcatggtgatggt
gttgaagaagcattctacactaccgacagagtcatgactgtgtcattccacaaatatggt
gaatactttcctggaacaggtgacctcagggatattggtgctgggaaaggaaagtactat
gctgtcaacattcctctccgggatggtatggatgatgaaagctacgaatctatctttgtt
ccaattatctcaaaagttatggaaaccttccaaccaagtgctgttgttcttcaatgtggg
gctgattcactcaccggtgatagattagggtgcttcaatctcactgtcagaggacacgga
aaatgtgtggaatttgtgaagaaatatggaatgcctttcctcatggttggaggtggagga
tacaccatccgtaatgtatcaagatgctggacctatgaaacatcagtagctctcggaact
gaaatagcaaatgaactgccttacaatgattattttgagtattttggaccagattttaag
ttgcatatcagcccatccaacatggctaaccagaatactccagaataccttgaaaagata
aagacaaggctgtttgaaaacttgagaatgcttcctcatgctccaggagttcaagttcaa
gctattcccgaagatgcagttcgagaagaatctgacgatgatgataaagccaacccagat
gagagacttactcaggcagctcttgataaacgtatcgttcctgacaatgaattcagtgat
tctgaagatgaaggtgagggcggcagaagaaacgatcgttcattcaagggtagaaaacgt
ccccgtttagatacgaagactccagctgatgctaatgaggagaagctgaagagtgaggga
gatggtgccaaaccagagggcaagactgaagagaaggacgagaaagtggcatctagtgac
gatgctaaaaaggatgctgcaccaaatccttga
DBGET
integrated database retrieval system
