Frankliniella occidentalis (western flower thrips): 113203699
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Entry
113203699 CDS
T07591
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113203699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
foc03009
]
113203699
Ribosome biogenesis [BR:
foc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113203699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
WDR54
Beta-prop_NWD2_C
WD_LRWD1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
113203699
NCBI-ProteinID:
XP_026274286
UniProt:
A0A6J1S6B7
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MSAFKKTNVKVYSKNEQKLTPDNIYWKQFGVPVLLKEFGPVDYINFSPIEPYHFAVTCSV
RVQIYNPITKTVWKNLSRFREAAYGGSFRSDGRLLCAGGEEAVVRMFDVSSKTPLRVFKG
HSAPVHRCFFTPDNTHISSFSDDKTVRLWDIPSEKELSIFSDHQDYVRAGAVCPSSPDVV
LSGSYDRSVRLYDTRTSTQVLTVDHGSPVESVLFLPSGGIFLSAGGTEIRVWDAIAGGRL
LAKISQHHKTVTCLSLASGSKRLLSSSLDRHVKIYDVSTYQVVHTLDYPNAILSVAASAD
DETVVAGMVDGLVSVSRRETKEIPSKRERHKVSYRYVSDQREFPTADVVVREANADTMSK
SDTFLRKFQYSKALDSALLPYVVNKNPHVTVSVLQELMRRKGLQTALAGRDAKSLLAILR
FLVKYIGDYRYSRTVTDVSNVLLDIYGDSWDKFPPDVCQMVQRLSVRAKDEVTFTQNLAS
LEGMMEILLAGSSVVSSESEGSAGIKSTQSAPTWHPSETAQKTFIVNVN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatttaagaagacaaatgttaaagtttattctaaaaatgaacagaagttaaca
cctgataacatttattggaaacaatttggggtaccagttctgttaaaggagtttggacct
gtggattatattaatttttctccaattgaaccatatcattttgctgtaacatgctctgtc
agggttcaaatatacaaccctataacaaaaacagtatggaaaaacttgtccagatttcga
gaggcagcatacggtggttctttccgatcagatggtcgtttgctctgtgcaggaggtgaa
gaggcagttgttcgaatgtttgatgtcagctctaaaacacccttgagagtattcaaaggc
cattcagcgccagttcatcggtgtttttttaccccggataacactcatatttcgagtttt
tctgatgataaaactgtccgtctatgggacataccaagtgaaaaagagctttcaatattt
tcagatcatcaggactatgttcgagctggtgctgtatgcccctcatcccccgatgttgtt
ttatctggcagttatgatcgatctgttcgattgtatgacacccgtaccagtacccaagtg
ttaactgtggaccatggctcgcctgtagaaagtgtcctgttcctaccttctggtggaata
ttcttatcagcaggaggaactgagattcgagtgtgggatgctatagcaggtgggagacta
ctagccaaaatatcgcaacatcataagacagttacatgtctttctttagcatctggaagt
aaacgattactttcatcatcacttgaccgacatgttaagatttatgatgtttcaacttac
caagttgttcatactttagattatccaaatgccatcctcagtgttgctgcaagtgctgat
gatgaaactgtagtagcaggaatggtcgatggcttagtttcagttagtcgacgtgagaca
aaagaaatcccatccaaacgagaaagacataaggtctcatatagatatgtgagtgaccaa
agagaatttcctacagctgacgttgttgtgcgtgaagcaaatgctgatacaatgtctaag
agtgatacatttttacgcaaattccaatattcaaaagcattagatagtgctcttctacct
tatgtagtgaacaaaaacccacatgtcactgtatctgtattacaagaattaatgaggagg
aaagggttacaaacagctttagctggaagagatgctaaatctctgttggcaattttaaga
tttcttgttaaatatattggggattatagatactcacgaacagtaacagatgtatccaat
gtacttttagatatttatggtgattcatgggataaattccctcctgatgtttgtcaaatg
gtccagaggctttctgtccgtgccaaagatgaagttacatttactcaaaatctagcctcc
ctggaaggtatgatggaaattcttcttgctggctcgtcagtggtctcatcagaatctgaa
ggatcagcaggaattaaatctacacaatcagcacccacttggcatccatctgaaactgcc
cagaagacatttattgtaaatgtcaattga
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