Frankliniella occidentalis (western flower thrips): 113203719
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Entry
113203719 CDS
T07591
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X2
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113203719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
foc03032
]
113203719
03400 DNA repair and recombination proteins [BR:
foc03400
]
113203719
DNA replication proteins [BR:
foc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
113203719
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113203719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
RTT107_BRCT_5
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
113203719
NCBI-ProteinID:
XP_026274319
UniProt:
A0A6J1RZH5
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MASILLSQAEEDDVDLIFVIPQNLKNHSDCDKNMQDAFRSCEDNTLNPSWKTEESCLELK
PTKKSVFVLQEFSGKAFEYLKRFKCVITGPRCLNHCLIREEHMPLVPHPTFTAAMKDLVI
TSSGGGLEVKKEIKEKVELMSGTYAKGFNETTTHVVVSSVASTKYEKALELGIPVRTHEW
VNAVWKRSLKEYILATDEIFNDFKCPPFLNLNVCATGFIIKELDRLRNLVAQNGGNFDPS
FSQKIDVLVVKHPKGEKYKYAQQWNIPCVEPKWIYDSVQNGHNLPTKSYEVKGGRAASSP
TMGNASVNFSANVSSIQLDHRTHIDETLMNSSISSVASYCPISKAKTPVKMPPPASVKTP
VKSKILPCSNPGELKHLLSELNLSHAKKAGLFLDGCRVYLLGWNPDETESLRKILKCSGA
ARFTDLSERVSHVLVGNLEKPFLRTLKGLPQKPHVVNIKWLIQSVAEKKPVLEEPFICLP
SENVNVSEAPSPLSKKGMALLQNFSPQKPLPKPNHSDIKSETKTTASPNKGDQLLAKYIS
ADSSAVCMPPPPVPSAKKQILQPVNISKNANNSDVVSQEENDMFFTGLKFVIVGLPDESA
SYAEKDLIKKHGGEVVPKSFKGVPDYAVVPLTGFTLRQTATEIITILWLEACCEHQSIVS
VEYYHQPVVLDVTKKPLESCVIGLSGFSGRERQFILELASALGATCQEVFAKKTKTDAKA
SSHLICKSDVKSAKFDAAIKWFRPAVYHSWLLSCASTGSHVPETGHLVDPKQVIKPLDAM
NNTTTSFINSSSVINKRQSSLKQPACMKTPEQTALPPELMNQVDKILNYVPSPNPHAVKT
PPVLIGISDNPTPGESKRIQKWLDKLPGQLPASPSRRDSTPLHELRKRVLRAHTVTTPEM
LHEVPVQDKELEDFPESATAMMAQAEEKQSSPIKPISCSTPTYSGNSNASRKLFKINSDS
ASPVECQLDKLKRLIATPETGEDCSSSKSASLNHLRVAGNPHKSVIYDPLKDGSQPYAIQ
WEDPVNLKRSVSEESVTPNQDEKGNELPAKRKSSENAENAPEPKKLHHEIPKTDSKRASS
GKVYKFCMSAVETKEPHISTIQKLGGVLIDSQSYNPEATHLLLEKAPQRSEKLLAFIAAG
KWVLHMSFLFESDKHGEFLPEEDFEWGNPKNNLLSRLKPNTVEESMAKAVYRWRTTISEN
GGRGAFSDFVCKIFSEKALPFSRLVAAGGGKVLPEKSQKIPSLCIVTLSTHKGCLDTFAR
QGIPCVPPTYLYEHLTQDPIPTPEARAYDEYKMLRKKYLSDQ
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatcttgctttcacaagcagaagaggatgatgttgacttaatttttgtcatt
cctcaaaatttaaaaaatcacagtgactgcgataaaaatatgcaagatgcatttcgaagt
tgtgaagataatacactgaatcccagctggaagacggaagagtcctgcttagaattaaag
cccaccaagaaaagcgtttttgttctacaagaattttcaggaaaggcatttgaataccta
aaaagatttaagtgtgttatcactggtcctagatgcctcaatcattgtttgattcgagag
gaacacatgcctctcgtacctcacccaacgtttactgctgccatgaaagaccttgtcatt
acttcaagtggagggggcttggaagttaaaaaagaaattaaagaaaaggttgaacttatg
tctggtacctatgcaaaaggcttcaatgaaactaccactcatgttgtggtatcttctgtc
gcatcaaccaaatatgagaaagcattggagttgggtatcccagtgaggactcatgaatgg
gtgaatgctgtatggaaacggagcttgaaagaatacattctagcaactgatgaaattttc
aacgattttaagtgtcctccttttttaaatttgaatgtttgtgcaacaggttttataatt
aaagagttagatcgcttaaggaatcttgttgcacagaatggagggaactttgacccatct
ttcagtcagaaaattgatgttttagttgtaaaacatcccaaaggggagaagtacaaatat
gcacaacaatggaatattccatgtgttgaacccaaatggatttatgatagtgtacagaat
ggtcataacttaccaaccaaatcatatgaagttaaaggtggcagggctgcctcatctcca
actatgggcaatgcctctgttaatttttctgccaatgtgagcagcatccagcttgatcat
cgaacacacattgacgaaacattgatgaattcatccataagtagtgtagctagttattgt
cccatttcaaaagccaaaactcctgttaaaatgccccctccagcttctgtaaaaactcca
gtgaagtcaaaaatcctaccttgttctaaccctggggaattgaagcatctcctcagtgaa
ttaaatctaagccatgcgaagaaagcaggtttattcttagatggttgtcgggtctattta
ctgggatggaatcctgatgaaacggagagcctgaggaagattttaaaatgtagtggtgca
gctcgtttcactgatttatctgaaagggtatcacatgtgctagttgggaacttagaaaag
ccatttttgcgaactttaaaaggattacctcagaaacctcatgtagtcaatatcaagtgg
ctaattcagagtgtggctgaaaagaaaccggttttggaagagccattcatttgtttgcca
agcgaaaacgtgaatgtttctgaagctccttccccattaagtaaaaagggaatggcactt
cttcaaaatttttctccacaaaagccactgccaaagccaaatcattctgacattaaaagt
gagactaagacaaccgcatctccaaacaaaggtgatcaacttctggcaaaatatatttca
gctgactcctctgctgtctgtatgccgccaccacctgttccatctgcaaaaaagcaaatt
ctacagccagtcaatatctctaaaaatgcaaataatagtgatgtggtgagtcaagaggaa
aatgatatgttttttactggtttaaagtttgtgattgttggactccctgatgaatcagcc
tcttatgctgagaaagatttgattaaaaaacatggtggggaagttgttcccaagtcgttt
aaaggagtacctgattatgcagttgtacccttgacagggtttacactcagacagacagct
actgaaataataactatactctggctggaggcctgctgtgaacatcaatctattgtgtca
gtggagtattaccaccaaccagttgttttggacgtaacaaagaaaccacttgagagctgt
gttattggtctcagtggtttttctggaagagaacgccaattcattttagaactagcttca
gctcttggtgctacatgtcaagaagtctttgcaaaaaaaactaaaactgatgcaaaagca
tcatcacacctcatctgtaaaagtgatgtgaaaagtgccaagtttgatgctgccataaaa
tggttccgtcctgctgtatatcattcgtggcttcttagttgtgcatctaccggttcacat
gtacctgaaacgggtcatctagtggatcctaagcaggttatcaagccacttgatgctatg
aacaatacaactaccagttttataaatagctcttcagtaatcaacaaacgtcagtcttca
ctgaagcaacctgcctgcatgaaaactcctgagcaaactgccctcccaccagaattgatg
aatcaggttgataaaattctcaattatgttccatcccctaaccctcatgctgttaaaaca
ccacctgtgctaattggtatttctgacaatccaacgcctggtgaaagcaaacgcattcag
aagtggttggacaaattacctggtcagttgcctgcttctccttcaaggagagattctacg
cctctacatgaattaagaaagagagttttacgagctcacactgtgactactcctgagatg
ttacatgaagttcctgtgcaagataaggaattagaagattttcctgagtctgcaacagcc
atgatggcacaagctgaagaaaaacaatcaagtcccatcaaacccatttcatgtagtaca
cctacttatagtggaaactcaaatgcttctcgaaaattatttaaaatcaactctgattct
gcctctccagttgaatgccaattagataagcttaaaagacttattgcaacaccagaaaca
ggtgaggattgctcttcctcgaagtcagctagtttgaatcatttgagagttgctgggaat
ccacataaatctgtgatatatgatcccctcaaagatggttctcaaccatatgctattcag
tgggaggacccggttaaccttaagagatctgtctcggaagaaagtgtgactcctaatcaa
gacgagaaaggaaatgaactgccagccaaaagaaagagctctgaaaatgctgaaaatgct
cctgaaccgaagaagttacaccatgagatccccaaaactgattctaaaagagcaagttct
ggaaaggtgtacaagttttgcatgtctgctgttgaaaccaaagaaccccatatatccacc
atacaaaaacttggaggagtcctcattgattcccaatcatacaatccagaggcaactcat
cttctacttgaaaaggccccacagcgcagtgaaaagttattggcttttattgctgctggg
aaatgggttttacacatgtccttcttgtttgagagtgataaacatggggaattccttccg
gaagaagactttgaatggggtaacccaaaaaacaaccttttaagtcggttgaaacctaac
actgttgaagaatccatggcgaaagctgtttatcggtggagaaccaccatatctgaaaat
ggaggtcgtggtgcatttagtgattttgtttgtaagatattttcagaaaaagctcttcct
ttttcaaggttggttgctgcagggggtggtaaagttctacctgaaaagtctcagaagatc
ccttctctctgcattgttactttgtctacccacaaggggtgtcttgatacatttgctagg
caaggtattccttgtgtacctccaacatacctgtatgagcacctcacgcaagatcctatc
ccaactcctgaagcaagggcttatgacgagtataagatgttgaggaagaaatatttatca
gatcagtaa
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