Frankliniella occidentalis (western flower thrips): 113203900
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Entry
113203900 CDS
T07591
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113203900
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113203900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_11
TPR_10
TPR_6
TPR_9
TPR_7
ARM_TT21_5th
ANAPC3
TPR_MalT
TPR_Slam
TPR_4
ARM_TT21_4th
TPR_21
ARM_TT21_C
TPR_EMC2
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
113203900
NCBI-ProteinID:
XP_052125446
UniProt:
A0A9C6WXF4
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MSGSIEIPLRETDEVVELKIDQLPEAEVVISILCQEHVQLQLWVNVALEYYKQNKFEDFV
TILERSTQEANTEYNDYERDQMRALDMLAAYYVQLANQERIKEKRDKLFDKANLLYNTAD
KIIMYDQNHMLGRAYCRLLEGDKMDQAETQFNFVLNQSPNNIPSLLGKACIAYNKKDYRA
ALAFYKKALRTNPNCPGAVRLGMGHCFMKLGNPDKARLAFERALQLDPKCVGALVGLAVL
KLNIQEPDSIKDGVQMLSTAYRIDSTNAMVLNHLANHFFFKKDYTKVRQLALHAINNTEN
EPMRAESCYQLARALHVQGDYDQAFQYYYQATQFAPAHFVLPHFGLGQMYIYRGDTENAA
QCLEKVLKIQPTNYETMKILGSLYANSSSQSKRDIARSHLRKVTEQFPDDVEAWIEMAQI
LEQSDLAGALQAYHTTIRILKEKVQVEVPPEILNNVGSLHYRLGNLEESKNSFAESLGRS
RAEAEQDPQYYNSIAVTTTYNLARLHEALCSFNQAERLYKDILKEHPNYIDCYLRLGCMA
RDKGQIYEASDWFKDALRINTEHPDAWSLLGNLHLAKMEWQPGQKKFERILNNPATSTDT
YSHIALGNVWLTTLHQPTKEKEKEKRHQERALQIFKSVLRIDPRNIWATNGIGAVLAHKG
CTNEARDIFAQVREATADFCDVWLNIAHIYVEQKQYISAIQMYENCLRKFYKYHNVEVLQ
YLARAYFKAGKLREARTVLLKARRVAPLDTVVLYNIALVLQRLATHILKDEKSTLSTVLQ
AVTDLGLSLKYFEHLSVHGDRMRYDVNLAGAEARQCQDLLSQAQYHVARARRVDEEEKKM
RKKQEEERAAFRLKQKKEMKLMEERRRQAQEDLLQRRAEYKEKTKNALTFADFPPEMKPK
KGRGRRTTGDGEILSDSGSEGEAGPSEPREKKPKERKKKSQSGSRRRRKEDGSGSDRPTK
KRSRIVEKGARKSRPSDEGMSKAQKSRIISKETISTSESDSDSGKSEKRKSNKSDKSDRS
DRSDHSDKSDKSDKSDKSDKSDNSDNSDSEREKSSGKENASGKENSSGKDNSSGNESD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatcaattgaaattccgctaagggaaactgacgaagttgtagaattaaaaatt
gaccaactgcctgaagcagaagttgtcatctccatcttgtgtcaggagcacgtccaactt
caactatgggtcaacgttgcgcttgagtactacaaacagaacaaatttgaagactttgtc
acaatcctagaacgttccacccaagaggctaataccgaatacaatgactatgaaagggat
cagatgcgagctcttgatatgctggctgcatactatgtgcagctggctaatcaagagcgt
atcaaagagaaaagggataagctgtttgacaaagccaatttactatacaacacagctgat
aaaattatcatgtatgaccagaatcacatgttgggtagagcttattgccgtttgcttgag
ggagacaaaatggatcaagctgaaacacaatttaactttgtgttaaatcaatctcccaat
aacatcccctcattacttggtaaagcttgcattgcttataataagaaagattacagggca
gctttagccttctataaaaaggcccttcgcaccaatcccaattgcccaggtgctgtacgt
ctgggtatgggtcactgttttatgaaactgggcaaccctgataaagccaggttggccttt
gagcgagcgctgcagttggaccctaaatgtgttggagcactggtgggtcttgctgttttg
aaattgaatattcaagagcctgacagtatcaaggatggtgtacaaatgttatcaacagct
taccgaatagactcaacaaatgctatggttctaaatcatcttgccaatcatttctttttc
aagaaggattatacgaaagtgcgacagctagccctacatgctattaataacacagaaaat
gaaccaatgagggctgaaagctgctaccaacttgctcgtgctttgcatgtccaaggagat
tacgatcaagctttccaatattactatcaagcgactcagtttgcccctgcccattttgtt
ctccctcactttggtttggggcaaatgtatatatacagaggagacacagaaaatgcagca
caatgtttagaaaaagtactcaaaattcagcctacaaactacgaaactatgaaaattttg
ggttcactttatgctaactcaagcagccagtctaaacgtgacattgccagaagtcatcta
cgtaaagttacagaacaatttcctgatgatgtagaggcttggatcgagatggcacaaatt
cttgaacagtcagatctggcaggtgcccttcaagcttatcacacaaccatccgtatattg
aaagaaaaagttcaggtagaagttcctccagaaatattgaacaatgtggggtccttgcac
tacagattgggaaatttggaagaatctaaaaacagctttgctgaatccctgggcagatca
agagctgaagctgagcaagatccacaatattataactctatagcagtgaccacgacttac
aacttggcaagactgcatgaagctctttgttcatttaaccaagctgaaaggttatataag
gacattttaaaagagcatcctaattacatagattgttatctcagacttggttgtatggca
agagataaaggtcagatttatgaagcttctgattggttcaaagatgctttgcgtatcaat
actgagcatccagatgcctggtctctattaggaaacctccatttagccaagatggagtgg
cagcctggtcaaaagaaatttgagaggattttaaataaccctgctacttctactgatacc
tattctcacattgccttgggaaatgtttggctcacaactctacaccaaccaacaaaggag
aaagaaaaagaaaagcgccaccaggaaagagcacttcaaatcttcaaaagtgtgttgaga
atagatcctagaaatatatgggctacaaatggaatcggagctgttcttgcacacaaaggc
tgtaccaacgaagcccgtgatatttttgcgcaagttcgtgaagctacggcagacttctgt
gatgtttggctcaacattgcgcacatatatgttgagcaaaagcagtacattagtgctatt
cagatgtatgagaattgtctcaggaaattctataaatatcacaatgtagaagttttacaa
tacctagctcgtgcatacttcaaagcaggcaaactgcgagaagctcgcacagttctgttg
aaagcacgtcgtgttgcccctctcgacactgttgtcttatacaacatagcactagtactc
caaaggctggctactcatattctgaaagatgagaagtcaaccctcagtacagtactccaa
gctgtgactgatcttggtctttctttgaaatactttgaacacctctctgtacatggtgat
cgcatgcggtatgatgtgaatctagctggtgcagaggctaggcaatgccaagatcttctc
tctcaagcacaatatcatgttgctcgagcacgaagagtggatgaagaagaaaagaaaatg
agaaagaaacaggaggaagaaagagctgctttcagactgaaacagaagaaggaaatgaaa
ctcatggaggagcgccggcgtcaagctcaagaagatttattgcagcgacgtgctgagtac
aaggagaagaccaagaacgcactcacatttgctgatttccctccagaaatgaagcccaag
aaaggtcgcggccgcagaaccacaggggatggagaaattctttcagattctggatctgaa
ggagaggctggtccttcagagcctagagaaaagaaaccaaaggaacgtaagaagaagtcc
cagagcggaagcagacggagaaggaaagaggatggatccggtagtgatcgtcctacaaag
aagcggtcaaggatagtggagaaaggagcccggaaaagcagaccaagtgatgagggcatg
tctaaggcccagaaaagtcgtattatatctaaggagacaatttcaacaagtgaatcagac
tcagattcaggaaagagtgaaaagcgtaaatctaataagtctgacaaatcagacagatca
gatcgatcagatcactccgacaaatcagacaaatcagacaagtctgacaagtctgacaag
tctgacaactcagacaactctgacagcgaaagggaaaagtcatctggtaaagaaaatgca
tctggaaaggaaaactcttccggcaaggataattcgtcagggaatgaaagtgactaa
DBGET
integrated database retrieval system
