Frankliniella occidentalis (western flower thrips): 113204005
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Entry
113204005 CDS
T07591
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113204005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foc03400
]
113204005
Enzymes [BR:
foc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
113204005
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
113204005
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
113204005
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113204005
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
113204005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Bdbt-like_TPR
DUF2039
Motif
Other DBs
NCBI-GeneID:
113204005
NCBI-ProteinID:
XP_026274784
UniProt:
A0A6J1S0U6
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MTVSLTSRSIVRQMSKGVKRECEDEAGNKAKKPGIGHWANGLITAMEDPNLKVLDDDQVV
VIKDKYPKAKFHFLILPKIPIPNLKALTDNHLDLLQHMHEVGCKISQENQHAKHKFRLGY
HAEPSMNHLHLHVISDDFCSDSLKTKKHYNSFTTDHFMNSAKVMDCLKKTGKVTTPSRGD
CEKFLKQPLVCFKCGENMATMPKLKEHLKSHV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgtctctgacatccagatcaattgttaggcaaatgtcgaaaggtgtaaaacgt
gagtgcgaggatgaggctggaaacaaggccaagaagcctggcattgggcattgggcgaac
ggattgattacagcaatggaggaccctaaccttaaggtgcttgatgatgatcaggttgtt
gttatcaaagacaagtatcctaaagcaaagttccatttcctcatattaccaaaaatacca
attccgaaccttaaagcccttaccgacaaccatttggatttactgcaacatatgcatgaa
gtaggatgcaaaatttctcaagaaaatcaacatgctaagcataaattcagactcggatat
catgctgaaccaagcatgaatcacttacatctacatgtgatcagtgatgatttttgctct
gattctttaaagaccaagaaacactacaattcattcaccactgatcattttatgaactct
gcaaaggtgatggattgtctaaagaaaacaggcaaagtaacaacaccatctcgaggtgat
tgtgaaaagttcttaaagcaacccttggtttgttttaagtgtggcgagaatatggcaacc
atgccaaaattaaaagaacatctcaagtctcatgtgtga
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