Frankliniella occidentalis (western flower thrips): 113204163
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Entry
113204163 CDS
T07591
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113204163
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
RFC1
Relaxase_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
113204163
NCBI-ProteinID:
XP_052123710
UniProt:
A0A9C6WYQ0
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MWPSTLLLLVCSAGAAYAQYPYTNGTSRLTSPQRAKTGTRTHTYISPSHRVVRGPPRPPP
APTPKRGDIPITDSDEAYAEYEGEAHPLSESYPDFQGSKWRGYQPHKLHPCDQSSCYPAT
GNLLIGREKQLHATSTCGLREEERYCIVSHLQESKKCFRCDSRPHERNPAKSHTIQNVIY
RDSPDSRVRSWWQAENGKENVSIQLDLEAEFHFTHVIITFKTFRPAAMLIERSYDFGDTW
KVYRYFALNCDQSFPGVPKHSPRSLTDVVCESRYSKVAPSTDGEVIFRVLPPSLKIDDPY
SIEVQNLLKMTNLRINFTKLHTLGDDFLDNRPEIQEKYYYSIFEMIVRGSCSCYGHASRC
LPRGDVTPRPDTVYGRCDCTHHTKGYNCEMCEDFYNDLPWKPAIGKQSNACKACNCNNHA
TNCHFDEAVYEETGRISGGVCDGCEHNTMGRNCEQCTQLFYHDPQRDFTDPEACQPCDCD
PRGSVDEGICDSRSDPENGLEAGKCHCKPNVDGRRCDRCKNGFWNFDENNADGCQACTCN
TLGTVGNQGCDMNTGECTCKRNVHGRDCNQCLPEHFGLSEDPDGCKACECDPGGAYDNNC
DILTGQCRCRPHVTGRQCNQPDQAFYTGLMDYNVYEAENAFGSDDCQVVTREPTPGGHDS
FTGIGFMRTFENSDLNFTIDDIRSSMDYDIVIRYEPQLPNGWEDVLVTVERDGEIDSDGP
CANTRPEDDIKHIRLTAGDRSAVVRPPACLEAGKTYHIKLSFKKYDQDGDKPTASILVDS
IALVPRPESIPFFQGTPENIRHRDDFERYRCADYFRLPTRGISVPEICKQFYNSIGFFVQ
NGAYPCECDPTGSISTLCTTLGGQCECKPNVGGRRCDRCEVGTYGFGPEGCRACDCNSIG
SLDNICSNSGQCKCRPNMYGRDCGQCQPGFWNFPTCQRCECNGYADTCDSYTGACIDCRN
NTNGTYCDRCDSGYYGDPRLGRDIPCRPCPCPDTQESGHSFANQCSLDPYTQDVVCECQE
GYAGPRCDVCGDNYFGNPDQPGGSCNLCNCSKNVDVSRPGNCDHRTGECLHCLFDTEGFN
CEVCKAGYYGDAVNQRCIACVCNVLGTNQTIGPCDGKTGQCPCLPNVVGLSCDECKPNHW
KIASGQGCEACDCDPTGSDETQCNPFDGQCKCRPGYGGRKCDQCEANSWGNPNIECHPCQ
CNAEGAATMQCHQNNGSCICTKGIGGYNCDECARGYLGNVPDCRECGECFNNWDRVLDEL
KMQTTEVLKSASEIKLKGATGAYSRQFEQMVKKIDEVKTILDETKLSANEIDGLQSLVNQ
LRKNLNQSMDELAQVEDLGRNTTQRILVANLTLADLGGKLDLLSSTAKGLHDNATKLQES
NVEGALNLTRLASHRSRQAQVEAERTKELSAEAERLCRRTENMVGKSSDRFQQLQDDNSK
ELENVSEKLAKLEDMIPELNKQVCGRSDTPSEDSCDALCGGAGCGFCGGLPCENGAARKA
ERALGYAQDADKQIRDKDSKAEDLFQGVSFAHQETEQAQRLVKEALEKAQIARNTSEVSL
NESTSIVDRLSNFLNVDHATPNDISTRASETLKKEIRREPEQITKLAADINGAIASLTDI
DKILNETRDDLNDALLLKIQATDAKNEAAGVLATAEKVIQALEEAREAQEMAEAAIDKAT
NDIESAGKDLAQIASETTEAQTKANETIVDVDKLQARVRDLQTRFLKNSRDVGELKAEAD
SVVRDGAIAKEGASKLRAKYETAASRLQDRSKLSNNSRQRAQKILNEASSLRIQTNDKLK
KLQDMGDVYSANEKQLSTITGLIDELNERMNDYLRNIKGKAEYYSMCTS
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgtcgactctgcttctcctcgtctgctcggcaggagcagcctacgcacagtat
ccatacaccaatggaacctcaagactgacttcgccccaaagagcaaaaacaggaacaaga
actcatacttacatttctccatctcatcgagtggtcagagggccacccagacctcctcct
gctccaactcccaagcgtggcgacatccctatcacagatagtgatgaagcctatgcagag
tatgagggtgaagctcaccccctcagcgaatcttatcctgattttcaaggttcaaagtgg
cgagggtaccagccacacaagttacacccttgtgatcaaagctcatgctaccctgccact
ggaaaccttttgattgggcgagagaagcagctccatgcaacttcgacttgtggattaaga
gaagaggaacgctactgtatagtttcccatttacaagaaagcaaaaagtgctttagatgt
gactcaagacctcatgaacgtaatcctgcaaaatctcatactattcagaatgtcatctat
agagacagtccagactcaagagtcaggtcatggtggcaagcagagaatgggaaggaaaat
gtttcaattcaattggatttggaagctgaatttcattttactcatgtcatcatcactttt
aagacattcagaccagctgccatgttgattgagcgttcttatgattttggtgacacttgg
aaggtttatagatattttgcattaaattgtgaccagtcattcccaggagtgccaaaacat
agtccacgatctctgactgatgttgtttgtgagtctaggtactctaaggttgcaccctcc
actgatggtgaagttattttccgagttcttcctccttccttaaaaatagatgatccatat
tctattgaagttcaaaaccttttgaagatgacaaacttgaggattaactttactaaactt
catacccttggtgatgattttcttgacaatagaccagaaattcaggaaaaatattactac
tctatttttgaaatgatagttcgtgggtcctgctcatgctacggacatgcttctcggtgt
ctgcctcgaggtgatgtgacacctagacctgacacggtgtatggtcgttgtgactgcact
catcatacaaaagggtataactgcgaaatgtgtgaggatttctacaatgacttgccatgg
aagcctgctattggaaaacagagcaatgcttgcaaggcatgtaactgcaacaaccatgct
acaaattgtcactttgatgaggctgtttatgaagaaactggacgtataagtggaggagtg
tgtgatggttgtgaacacaatacaatggggcgaaactgtgaacagtgtacccaattgttt
taccatgatcctcagagagattttacagatcctgaggcatgccagccctgtgactgtgat
cctcgaggttccgtggatgaaggtatttgtgactctcgctctgatcctgaaaatggattg
gaggctggcaagtgccactgcaagccaaacgttgatgggcgtcggtgtgaccgctgcaag
aatggtttctggaactttgatgaaaataacgcggatggttgtcaagcatgtacctgcaac
acattgggaactgtgggtaaccagggatgtgacatgaacactggagagtgcacctgcaag
agaaatgttcacggaagggattgcaaccagtgtttgcctgaacactttggactgtctgaa
gatccagatgggtgcaaagcttgtgaatgtgaccctggtggtgcttatgacaacaactgt
gatattctcacaggtcaatgccgatgccgccctcatgttactggaagacagtgcaaccag
cctgatcaggctttctatactggattaatggattataatgtgtatgaagcagaaaatgca
ttcggcagtgatgattgccaagttgttacccgtgagcctacaccaggtggacatgattcg
ttcactggcattggctttatgaggacctttgaaaattctgatttgaatttcacaattgat
gatatcagatcaagcatggattatgacatagtcattcgatatgagccgcagcttcctaat
ggttgggaagatgtacttgtgactgtggagcgagatggtgaaattgactcagatggtcct
tgtgctaatacaaggcctgaagatgatatcaagcacattcgattaacagctggggacagg
agtgctgttgtcagacctccagcttgtttagaggcaggcaagacttaccatattaaactt
tctttcaagaagtatgatcaggatggagataaacctacagcatccatccttgttgattca
attgccttggtcccacgtccagaaagtataccatttttccaaggcactccagaaaatatc
agacatagggacgattttgaaaggtatcggtgcgcagactattttagattgcctaccaga
ggaatttcagtcccagaaatatgcaagcagttctataatagcattgggttctttgtgcag
aatggagcgtatccttgtgagtgtgatcctactggatctataagtactctttgtaccaca
cttgggggacagtgtgaatgcaaacccaatgttggaggtcgtaggtgtgatcgttgtgaa
gtgggaacctatggctttgggccagaaggatgccgagcttgcgattgtaactccattgga
tcattggacaacatctgcagcaattcaggacaatgcaaatgccggccaaatatgtatggc
agggactgtggtcaatgtcaacctggtttctggaatttccctacctgtcagagatgtgag
tgcaatggatatgcagatacttgtgattcctacacgggtgcttgcattgattgcagaaat
aacactaatggaacatattgtgacagatgtgattctggttattatggagatccccgattg
gggagggatattccttgtcgtccttgtccttgcccggacacccaagaatctggtcattcc
tttgccaatcagtgctctttagatccctacacacaggatgtcgtttgtgaatgtcaagaa
ggatatgcaggtcctcggtgtgatgtgtgtggtgataattattttggaaaccctgatcaa
cctggaggttcctgtaacctgtgtaactgcagcaagaatgttgacgtctcacgccctgga
aactgtgatcatcgcactggagaatgtctccactgtctatttgacactgaaggatttaat
tgtgaagtttgtaaagctggctactatggggatgctgtaaatcagcgttgtattgcttgt
gtttgtaatgtgcttggaacaaatcaaacaattggaccctgtgacggtaagacaggccaa
tgcccatgcttgccaaatgtggttggtttatcttgtgatgaatgcaaaccaaatcattgg
aagatagcaagtggtcaaggttgtgaagcctgtgattgtgatcctacaggatcagatgaa
acacagtgtaatccgtttgatggtcagtgcaagtgcagaccaggatatggtggcaggaag
tgtgatcaatgtgaggccaattcatggggtaaccctaatattgagtgccatccatgccaa
tgtaatgccgaaggagccgcaaccatgcaatgtcaccagaataatggcagttgtatttgc
acaaaaggcattggtggttacaattgcgatgaatgtgctcgaggatatttaggaaatgtt
ccagactgtcgggaatgtggggaatgtttcaacaattgggatcgtgtgttggatgaatta
aaaatgcaaacaactgaggtgctgaaatcagcctctgaaattaaactgaagggtgctact
ggtgcatactcaaggcagtttgaacaaatggtcaagaaaatagatgaggtgaagactata
cttgatgagacaaaactgtctgctaatgagatagatggtcttcaatcacttgtgaaccaa
cttcgtaaaaatttgaaccagtcaatggatgaacttgcacaagttgaagaccttggcaga
aacacaactcagcgaatcctagtggccaatctcactcttgcagatcttggtggaaaacta
gacttactaagcagcactgctaaaggtttgcatgataatgctactaagttgcaagaatca
aatgttgaaggggcgttgaacttgaccagactagcatcacatagatcacggcaagcccag
gtggaggcagaacggacaaaggagctatcagcagaagctgaaagattgtgtcgtcgtact
gaaaatatggttggaaaatcatcagataggttccagcaacttcaagacgacaatagcaaa
gaacttgaaaatgtctctgagaagctagcaaagcttgaggatatgatccctgagctaaac
aaacaagtttgtggtagaagtgacacaccatcggaagacagctgtgatgcactttgcggt
ggagcaggttgtggattttgtgggggcttgccctgtgagaatggtgctgcccgtaaagct
gagcgagccctgggctatgctcaagatgcagacaaacaaattcgtgacaaagactccaag
gctgaggacctcttccaaggtgtttcatttgcacatcaagagacagagcaggcgcagcga
cttgtgaaagaagctttggaaaaagcccaaattgcaagaaatacatcagaagttagtctg
aatgaaagcacatccattgtggatcgcttgtccaacttccttaatgtggatcatgcaaca
ccaaatgatatcagtacaagggcctctgagaccttgaaaaaggagattcgacgggagcct
gagcaaatcaccaagcttgctgctgatatcaatggggcaattgcctccctgacagacatt
gacaagattttgaatgagactcgggatgacctgaacgatgctttattactgaagatccaa
gctactgatgccaagaatgaagctgcaggtgtcctagctacggccgaaaaggttatccaa
gctcttgaggaggcaagagaagctcaagaaatggcagaggcagccattgacaaggcaact
aatgacattgagtctgctggcaaagaccttgcacaaattgcaagtgagactactgaggct
cagactaaggcaaacgagactattgttgatgtggacaaacttcaagctcgtgttcgtgat
ttacaaactcgtttcttgaagaactctcgtgatgttggagaactaaaggctgaggcagat
agtgttgtgcgggatggtgcaattgccaaagagggtgcatcaaaactgcgagcaaagtat
gaaacagctgcttctcgtcttcaggatcgttccaagctttccaacaactcaagacagagg
gcccaaaagattctgaatgaagcttcaagtctacgaattcaaactaatgataaactgaaa
aaacttcaagacatgggggatgtatacagtgccaatgaaaaacagctttcaaccataaca
ggtttgatagatgaattgaatgagagaatgaatgattatttacgaaacatcaagggtaaa
gcagagtactacagtatgtgtacgtcatag
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integrated database retrieval system
