Frankliniella occidentalis (western flower thrips): 113204188
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Entry
113204188 CDS
T07591
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113204188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113204188
03036 Chromosome and associated proteins [BR:
foc03036
]
113204188
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113204188
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113204188
Chromatin remodeling factors
BAF complex
113204188
PBAF complex
113204188
GBAF(ncBAF) complex
113204188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
BRK
SnAC
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
113204188
NCBI-ProteinID:
XP_052123895
UniProt:
A0A9C6U0H4
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MILTKDLDSGGPAGLPGSIQAGTSGNMSGNIPNGGVNGISNGLHDVPVNPSNGDSISTVA
QPVSTTKASKVSHEETLKGIENAIEALEHKGLQTDPRYLQLVALRNFHLSACPPPTVTPS
CDSPAPQFKLTASQLNQLRTQFMAYRLLARNQPLTSSLAMAIQGKGPLPPASSLSGSLSE
SLPPLPTPLPSSIPSQPHTQVVSGQPVPQNAQQQQQQHAAQQAAMRSRVTLITKPPGLDP
AIILQERENRLAARIALRMDELSNLPTNMDEDLRVKAQIELLALRLLNFQRHLRSEVVAC
TRKDTMLETAASIKTNKRPKRQGLREARATEKLEKQQKVEAERKRRQKHQEYLNAVLQHA
KDLKEFHRNNLAKIQRINKSVVGYHANAEREQKKEQERIEKERMRRLMNEDEEGYRKLID
QKKDKRLAFLLDQTDEYIMNLMNLVKEHKAEQAKVQKELKEQRKQMRKKKKTKKRKNDDL
DDDSSQSEMRVAVLDKTTGTVLSGEDAPMASELQQWLEEHPGWERLDDSDEENEDDSGSS
DEEQQDDESRDDRISDDDKAKQVILKAKTEDDEYKSSADGQTYYSIAHTVNEKVTQQASI
MVNGKLKEYQIRGLEWLVSLYNNNLNGILADEMGLGKTIQTIACITYLMEIKKVNGPYLI
IVPLSTMSNWVLEFEKWAPSVQVVAYKGSPAVRRDLQNQMRASKFNVLITTYEYIIKDKS
VLAKLHWKFLIIDEGHRMKNHHCKLTQVLNTHYVAPHRLLLTGTPLQNKLPELWALLNFL
LPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQL
PDKVEYIIKCDMSGLQRVLYRVMQTQGVMLTDGSEKGKQGKGGAKALMNTIMQLRKLCNH
PFMFQHIEKAYCEHHGQHSGIVTGPDLFRASGKFELLDRILPKLKATNHRVLMFCQMTQL
MTILEDYLSWRGFLYMRLDGTTKAEDRGDLLKKFNDPASEYFLFLLSTRAGGLGLNLQAA
DTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKV
IQAGMFDQKSTGSERQQFLNTILHQDDREDEEENEVPDDEVVNQMIARHENEFDLFQKMD
IQRRESETQSRLIQESELPDFLMRDDEEVENICEEEDEDTQELGRGSRQRKEVDYTDSLT
EREWLKAIAEEGEEGEEEEDEVDGSHRKSKKKSRKKKHREEDSSSHSSRKKAKMEVPNNV
KHAMRCAIDIVMKYTENGTAIAEPFVKLPAKKALPEYYEVIKKPMDIRKLNQRITDNKYA
TLDDLEKDFNLMCSNAQTYNEEDSDLYNYSVTLYGVFRQARAQVESELLSKEDGADDEAS
VSGVTVSEHPGGGSVRVKIKLPKPPASSRRRHFDDEADMGESDNARGFEDSMDID
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgattttaacaaaggatcttgattcaggtggcccagctggactacctggtagtatccaa
gcaggtacctcaggcaacatgagtggaaatatccctaatggcggtgttaatggaatttcg
aatggtttacacgatgttccagtcaacccatccaatggtgattcaatcagcactgttgca
caaccagtttccaccaccaaggcatcaaaggttagccatgaagaaacactcaaagggatt
gaaaatgctattgaggcactggaacacaaaggcttacaaactgatcctcgatacctccag
cttgttgcactgagaaatttccacctctctgcatgccctcctcctacagttacaccttct
tgtgattcacctgctcctcagtttaaactgactgccagccagctaaatcaattgagaaca
caatttatggcataccggcttttagctcggaatcaaccactcaccagctctcttgctatg
gccattcaaggaaaagggccacttcctcctgcaagctcactttcaggatctctaagtgaa
tcgttacctcctcttccaactccgttaccatcatctattccatctcaacctcatactcaa
gtggtctcagggcagcctgtacctcaaaatgcccagcaacaacagcagcagcatgctgca
caacaagctgctatgagaagccgtgtaacacttataacaaagcctccaggcctagatcct
gccatcattcttcaagaaagagaaaatagacttgctgctcgtatagctttacgaatggat
gaactaagcaacctacctactaacatggatgaagatttgcgtgtgaaagctcaaattgaa
ctcttagctttgcgattgctaaactttcagagacatttacggtctgaggttgttgcctgc
acccgtaaagatactatgcttgaaactgctgctagtataaaaactaataagcgccctaag
agacaaggtttaagggaggctcgtgccactgagaaactagaaaaacaacaaaaggtggaa
gctgaacgtaaaaggaggcagaaacatcaggagtatctcaatgcagttttgcagcatgcc
aaggatcttaaagagttccaccgcaataaccttgctaaaattcaacgtattaataaatca
gttgtgggttatcatgcaaatgcagagcgtgaacagaagaaggagcaagaaagaattgaa
aaagaacgtatgcggaggctcatgaacgaagatgaagaaggttaccgtaaattgattgat
cagaagaaggataaaagattggcattcttgctggatcaaactgatgagtacatcatgaat
ctcatgaatcttgttaaagagcacaaggcagaacaggctaaagttcaaaaagaacttaag
gaacaaagaaaacaaatgcgtaagaaaaagaaaaccaaaaaacggaagaatgatgattta
gatgacgactcctctcaatcagaaatgagagtagcagttctggataaaactactggtact
gttctctctggagaagatgcacctatggcttctgagctccagcagtggttggaggaacat
ccaggttgggaaagattagacgatagtgatgaagaaaatgaagatgattccggttcctct
gatgaagagcagcaagatgatgagagcagagatgatcggatatctgatgatgacaaagct
aagcaagttattctgaaagccaaaactgaagatgatgagtacaagtcatcagcagatggt
cagacctactacagcattgcccacacagtgaatgagaaggttactcagcaggcatccatc
atggtgaatggcaaactgaaggaataccagattcgtggtttggagtggttggtatccttg
tacaataacaatctgaatggaattcttgctgatgaaatgggtttgggcaagactatccaa
accattgcttgcataacttatttgatggaaattaaaaaagttaatggtccctacctcatc
attgtccctctatcgaccatgtccaattgggtacttgagtttgagaagtgggcgccttct
gtgcaagtggttgcatacaaaggttcccctgctgtccgacgagacttacaaaaccagatg
agagcatctaaatttaatgttctcatcacaacttatgagtacatcatcaaggataaatca
gttctggcaaagttgcattggaaattcctcattatagatgaggggcacagaatgaaaaat
caccattgtaaacttacacaagttttgaacacccactatgttgctcctcatcggctgcta
ctgactggtaccccacttcaaaacaaacttcctgagttgtgggctttgctcaattttctt
cttccttcaatatttaagtcatgttccacctttgagcagtggtttaatgccccatttgct
actactggagagaaggtagagttaaatgaagaagaaactattctcatcatcagacgtctt
cacaaagttcttcgtcccttcctcctgcggcgtttgaagaaagaggttgagtcccaatta
cctgacaaggttgaatatatcataaaatgtgatatgtctggtctgcagcgcgtattgtac
agggtaatgcagacacaaggtgttatgttgactgacggctctgagaaaggaaagcaaggc
aaaggaggtgctaaggctctaatgaacactatcatgcaattgcggaagctttgcaatcat
ccctttatgtttcaacatattgaaaaagcttattgtgagcatcatggacaacacagcggt
attgtaacgggtcctgatttattccgagcatcaggcaagtttgaactcctggaccgtatt
cttcctaaactgaaagcaacaaaccatcgtgttctaatgttttgccaaatgactcaacta
atgacaattttagaagactatcttagttggcgtgggttcctttacatgcgcctggatggt
actaccaaagcagaggatagaggagaccttttaaagaaattcaatgaccctgcgtccgaa
tatttccttttccttctgagtaccagagctggtggtcttggtttgaacttgcaagctgca
gatacagttattatttttgattccgactggaatcctcaccaggatttacaagcccaggac
agagcccatcgaattgggcagaagaatgaggtaagagtcctacgtttgatgactgtcaac
tcggtggaagaaagaattttagctgctgcccgatacaagttgaacatggatgagaaggta
attcaggctggcatgtttgatcaaaagtccactggatcagagcgacaacagttccttaac
accattcttcatcaagacgatagggaggatgaggaggaaaatgaagttcctgatgatgag
gttgttaatcaaatgattgcccgccatgagaacgagtttgacctcttccaaaaaatggat
attcaaagaagagaaagtgaaacacagagtcgtcttattcaagagtctgaactccctgat
ttcctaatgagggatgatgaagaagttgagaatatatgtgaagaagaggatgaggataca
caagaacttggcagaggatctagacagcgaaaagaagttgattacactgacagtctgaca
gagcgggaatggttaaaagcaattgctgaagaaggcgaagagggagaggaggaggaggat
gaagttgatggtagtcacaggaagtccaaaaaaaagtcacgcaaaaagaagcacagggaa
gaagatagctcctcccattcgtcacgcaaaaaagctaaaatggaagtgcctaacaacgtg
aagcatgctatgcgttgtgctattgatattgtcatgaaatatacagaaaatggtactgca
attgctgaaccatttgtaaagttgcctgctaaaaaagctctccctgaatattatgaggtg
ataaaaaaacccatggacatcaggaaactaaaccagcgcattacagataacaagtatgcc
actctcgatgacttagagaaagattttaatcttatgtgctccaatgctcaaacttacaat
gaggaagactcagatctctataactattctgtgacactctatggtgtattccgccaagca
cgagcccaagttgagtctgagctgctctctaaagaagatggagctgatgatgaggcctca
gtgagtggagttacagtatcagaacatcctggtggtggtagtgtaagggttaaaataaaa
ttaccaaaaccacctgcgagtagtagacggcggcactttgatgatgaggcagatatggga
gaaagtgacaatgcccgaggatttgaggattccatggatatagactaa
DBGET
integrated database retrieval system
