Frankliniella occidentalis (western flower thrips): 113204362
Help
Entry
113204362 CDS
T07591
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113204362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113204362
03036 Chromosome and associated proteins [BR:
foc03036
]
113204362
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113204362
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113204362
PBAF complex
113204362
GBAF(ncBAF) complex
113204362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
113204362
NCBI-ProteinID:
XP_026275312
UniProt:
A0A6J1S2T3
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MNILSPKKDGSPNAKFFESPETISLLDGVKTWLQKNAKKYIQTDPPTNKGLSSLLISLVQ
FQEDNFGKNTQKPQHTRLPMKLFLDMKPGGALCHILSTMYKFKSEQGWRRFDLQSPSRLE
RNIEMMGQVEKALNASKVFSPPNVFVRPDVDKQTAQKVKEVVKKHQGNITENESEASHIV
YPICDPLDEEYARPVLRRDRMVMMHWYYFPDSYDSWNSVELPVDPPDSPAPHTEAWRVGA
NWAIEMEQYNEWMNEEDYEVDEAGKKKVHKLRISVDDVMSLSDPSNKKGKPKRKRSPSPP
PKGKRKSGRSPAVVVGKKHKGDNDDDDLTKDMDDPPAEPNVSEVNVSKPALSSKKDSDLQ
PVKGGTVHDLDDDGDKNEDSQMGKASDTQEGTLKDDQEDNVTEQTHHIIIPSYSAWFDYN
AIHTVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCA
IMRVHAFLEQWGLINYQVDVDSRPTPMGPPPTSHFHVLADTPSGLQPVNPPKTPQPSAAK
TLLDMDKKEIPKKSDADPGSIFGLKLDQYARKPAALRNKTAASMTRDWTYQETLLLLEGL
ELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKAGN
PIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPANVIEQHLKSVEAAVAEGKTDPV
AGLLMTGIAGTEPEKDEEEKEKKDGEKSKDDKDKKDGEDGDKEGKEKDEKDSKEEDEKSE
KDGKEDAKDKESESEVDKAVKSAKEDKEKDVKDTKKEEKDTDKDVEMKEVEKKDSEKDAE
KEKDEPMDIDKKEGDEDEEKKEKDEEKTKDVPAKPKIVKDAQLQSAAAAALAAAAVKAKH
LAAVEERKIKSLVALLVETQMKKLEIKLRHFEELESTMEREREGLEYQRQQLITERQQFH
LEQLKAAEFRARQQAQQRLQMEHDQGGIPPASPLTQQQQQMQQTAPHPPAPHLQPPHPQQ
QPSPQATSA
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcttgagccccaaaaaagatgggagccccaacgccaaattcttcgagtcacct
gagactatttctcttttggatggagtcaaaacttggctccagaagaatgcgaagaagtac
attcaaacagatcctccgaccaacaagggactttcgtctcttctaatatcacttgtacag
tttcaagaagacaattttggtaaaaacactcagaaaccacagcacactcgccttcctatg
aagctttttctcgatatgaaacctggtggtgcactttgtcatattctttcaacgatgtat
aagtttaaaagtgaacaaggatggcgtcgctttgacttgcagtctccatcacgtttagag
cggaatattgagatgatgggacaagtagagaaagcattaaatgcatctaaagtgttttct
cctcctaatgtctttgtgagaccagatgttgacaagcagacagctcagaaagttaaagaa
gttgttaaaaaacatcagggaaatatcacagaaaatgagtcggaagcctcacacattgtc
taccctatttgtgatcctttggatgaagagtatgctcgcccagttcttcgccgggaccga
atggttatgatgcattggtactatttcccggacagctatgattcgtggaatagtgttgag
ctacccgtggatcctcctgattcaccagccccacacactgaagcgtggagggttggtgct
aactgggccattgaaatggagcagtacaatgaatggatgaatgaagaagactatgaagtt
gatgaggctggcaaaaagaaagttcataagttacgcatctctgttgatgatgtaatgagt
ttatctgatccgtcaaacaagaaaggcaagccgaagcgtaaacgttcacctagccctcca
ccgaaaggcaagaggaaaagtggtcgcagccctgctgttgttgttggcaaaaaacacaaa
ggggataatgatgatgatgatctgaccaaggatatggatgatcctcctgctgagccaaat
gtgtctgaagttaatgttagcaagccagcgctttcttccaagaaagatagtgaccttcag
cctgttaagggtggaacagttcatgatttagatgatgatggtgacaagaacgaggacagc
caaatgggaaaagcttcagacacccaagaaggaactttgaaagatgaccaagaggacaat
gtgactgagcaaactcaccacataataattccaagctattcagcatggttcgattacaat
gctattcatactgttgagaagagagctcttccagaatttttcaatggcaagaacaaaagc
aagacacctgaaatctatctggcttaccgcaacttcatgattgatacatacagactaaac
cccactgagtatataactagcacagcttgcaggcggaacctggctggtgatgtgtgcgcc
atcatgcgcgttcatgctttcttagagcagtggggtcttatcaactaccaggtggatgtt
gacagccgacccactcccatgggtcctccgcccacctcccacttccatgttttggcagat
acaccgagtggattgcagcctgttaacccacctaaaactccacaaccatctgctgctaaa
actcttctggatatggacaaaaaagaaattcctaagaaatctgatgcagatccaggaagc
attttcggtctaaaacttgaccagtatgctcggaaaccagcagcactgcgcaacaagact
gctgctagtatgacccgtgactggacttatcaggaaactcttctgctgcttgaaggtctt
gaactctacaaggatgactggaacaaagtttgtgaacatgttggcagcaggacacaagat
gagtgcatcttgcacttcttgcgtttacctattgaagacccttacctcgaggaccatgaa
gctggaggtgctcttggtcccttggcgtaccaacccattccgttcagtaaggctggaaat
cctatcatgtccactgttgctttcttggcatcagtagttgatccacgagttgctgcatct
gctgcaaaggctgccatggaggagtttgccaacatcaaggatgaagtgcccgctaatgtt
atagagcaacacttgaagagtgttgaggcagctgttgcagagggaaagactgatcctgtt
gctggccttcttatgactggtattgctggtacagaacctgagaaagatgaagaagagaaa
gagaagaaagatggggaaaaatcaaaggatgataaggacaagaaagatggtgaagatgga
gataaggaaggtaaggaaaaagatgagaaagatagcaaagaggaggacgaaaagagtgag
aaagatggaaaggaagatgcaaaggacaaagaatctgagtctgaggttgataaagcagtc
aagagtgctaaagaggataaggaaaaggatgttaaggataccaagaaggaagagaaggat
acagataaggatgtagaaatgaaagaggtagagaaaaaagattcagaaaaagatgctgaa
aaagagaaggatgagcccatggatattgataagaaggaaggagatgaggatgaagaaaag
aaggaaaaggatgaggaaaaaactaaagatgttccagctaagcctaagattgttaaagat
gctcaattacagtcagctgcagctgctgctcttgctgctgcagcagtgaaagccaagcat
ctggcagctgttgaggaacgtaagatcaaatcccttgttgctttacttgtggaaacacaa
atgaagaagcttgaaattaaactaagacactttgaagagttagagagcactatggaaaga
gaaagagagggcctagagtaccagcgtcaacagctaattacagagagacaacagttccac
cttgaacagttgaaggcagctgaattcagggcaagacagcaggctcagcagagactgcaa
atggaacatgatcaaggaggtataccgccggcttcacctttgactcagcaacagcagcaa
atgcagcaaaccgctcctcacccacctgcaccacatttgcaaccaccccacccacagcag
caaccttcaccgcaagcaacgtcagcttaa
DBGET
integrated database retrieval system
