Frankliniella occidentalis (western flower thrips): 113204566
Help
Entry
113204566 CDS
T07591
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113204566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113204566
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113204566
U7-dependent histone pre-mRNA processing factors
113204566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
113204566
NCBI-ProteinID:
XP_026275560
UniProt:
A0A6J1S8J9
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MTSTSIIKLHTVSGSMDESPPCYILQVDEFRFLLDCGWNEKFDPEFIKELRRYANQIDAV
LLSYPDPLHLGALPYMVGKCGLSCPIYATIPVYKMGQMFMYDLYQSWHNNSEFTLFTLDD
VDAAFDKIVQLKYNQSVSMKGKGFGLTITPLPAGHMIGGTIWKIVKIGEEDIIYATDFNH
KKERHLNGCELEKLQRPSLFITDAFNATYQQARRRTRDEKLMTNILQTLRNNGNVLVAVD
TAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGA
RNNPFQFKHLQLCHSIAELNKVPSPKVVLASTPDMECGFSRELFLQWSSNPNNSIIVTCR
TSPGTLARELIEHGTGCTLQLEVQRRVRLEGAELDEFYRKERETKEISKKKRGVDPDLSS
DSEDELDLSAVAKGKHDLLVKNEAKSHPGFFKSSKKQYPLFPFFEEKIKYDEYGELIRPE
DYKMVDGVADVDDDKENMVLKDLEIADPPEEVPTKCVTSTHTIRVAAQVQFIDFEGRSDG
ESLQKILGQLRPRRLILVRGTPDSTRAMMQHCQQWTDARIFAPSLGEVIDVTTETHIYQV
RLTDALVSSLDFKRGKDAELAWLDAQIVSRDVSRDAIRSSMDADDEEDRMKALKDGMEDE
IFTLEPLPMNEVEGHKTVLINELKLLDFKHVLLKNNIPSEFSGGVLWCFNNTIAVRKVEE
GHVTLEGCLCDEYYLVRDLLYDQYAIL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaacatcaataattaagcttcacaccgtgtctgggtccatggatgagtctccc
ccatgttacattttacaagtcgatgagtttcggttccttctagactgtggatggaatgaa
aaatttgacccagagttcattaaagaattacggaggtatgcaaatcaaattgatgcagtt
cttctatcataccctgaccccctgcatttaggagcattgccctatatggttggaaaatgt
ggattaagctgtccaatttatgctacgattcctgtttataaaatgggccaaatgtttatg
tatgatttatatcagtcatggcacaataattcagagtttactctctttacgcttgatgat
gttgatgcggcatttgacaagattgttcagttgaagtacaatcaaagtgtgtcaatgaaa
ggaaagggttttggccttaccattactcctttgcctgccgggcacatgattggtggcaca
atttggaaaattgttaaaattggtgaagaagatattatttatgcaactgactttaatcac
aaaaaagaacgtcatctcaatggatgtgaacttgaaaaattgcagcgtccatctctattt
atcactgatgctttcaatgctacttatcagcaagcaaggagacgaacaagagatgagaaa
cttatgactaacattctgcagactctacgaaacaatggcaatgttctggttgctgttgat
actgcaggacgtgtgctggaattagcccatatgttagatcaactttggcgtaacaaagaa
tcaggacttcttgcctattcattagctttgttaaacaatgtatcatataatgttgttgag
tttgcaaagagccagatcgaatggatgagcgacaaattaatgaggtcatttgaaggagca
agaaataacccgttccagttcaaacatctgcaattatgtcacagtattgctgaattaaat
aaagtccccagtccaaaagtagtgcttgcaagcacaccagatatggagtgtggtttttca
agggaactatttttgcagtggagttcaaacccaaacaacagcataattgttacatgcagg
acatcacctggtactttagctcgtgaattaatagagcatggtactggatgtactcttcaa
ttggaagtacaaagaagagtacgtttagaaggagctgagcttgatgaattttatagaaaa
gagcgagaaactaaagagatctctaaaaagaaaagaggagttgatcctgatcttagttca
gattcagaagatgagttagatctttcagctgttgctaaaggtaaacatgacctgttggtc
aaaaatgaagcaaaatctcatcctgggtttttcaaaagctcaaaaaagcagtacccatta
tttccattttttgaagagaaaattaagtatgatgagtatggagaacttatcaggccagaa
gattacaaaatggtggatggagtggccgatgttgacgacgataaagaaaacatggtttta
aaagatttagaaatagcagatccaccagaggaagtccccacaaagtgtgtaacttcaact
cacacaattagagtggctgctcaggttcaatttattgattttgaaggcagatctgacggt
gaatcattacagaaaatacttggtcagcttcggccaaggcggcttattttggtgaggggc
acaccagatagcacgcgtgctatgatgcaacattgtcagcaatggactgatgcaaggatt
tttgcaccaagtttaggtgaagttattgatgttaccactgaaacacatatttatcaggtt
cgcttgacagatgctcttgtatcatctcttgattttaagagagggaaagatgccgaactt
gcttggcttgatgctcagatagtatcaagagatgtcagtcgtgatgctattcgctcatcc
atggatgcagatgatgaagaggatagaatgaaagcattaaaagatggcatggaagatgaa
atatttaccttagaacctctaccaatgaatgaggttgaaggtcataagactgtgctcata
aatgaactgaaactattggactttaaacatgtcctattaaaaaataacataccttcagaa
ttttctggtggtgtactttggtgcttcaacaacacaatagcagttcgtaaggtggaggaa
ggtcatgtcacattagaaggttgcttgtgtgatgaatattatctagtaagggacctctta
tatgatcagtatgctattctatga
DBGET
integrated database retrieval system
