Frankliniella occidentalis (western flower thrips): 113204616
Help
Entry
113204616 CDS
T07591
Name
(RefSeq) hypoxia-inducible factor 3-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04137
Mitophagy - animal
foc04140
Autophagy - animal
foc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113204616
04137 Mitophagy - animal
113204616
04148 Efferocytosis
113204616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
foc03000
]
113204616
Transcription factors [BR:
foc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113204616
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS
PAS_3
PAS_9
HIF-1a_CTAD
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
113204616
NCBI-ProteinID:
XP_052130605
UniProt:
A0A9C6XTN3
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MLGKKSSKPRKERRRNTEKRKEKSRDAARFRRSRETEIFTDLSDALPLSPGAVAHLDKAS
IMRLAICYLKVRSLIHMVPEQVTPKADIMNDPLVMSAMEGFLLVLSADGDMVFLSENVHE
YLGLNQLDLMGHSIYEFSHPCDHDEIKEILSEKSVVNGGQRSVIPRSSFLRMKCTLTSKG
RNVNLKSASYKVIHYTGHMLTGPARVKEESDSDSASSSGDSGLGHGRVSSENCLVAIGEP
IPHPSNIEIPLDKQTFLSKHSLDMRFTYADDKIGEFLGYDPSDLVGKSMYEFHHAMDSEV
VEKGFKSLFSKGQCQTGRFRFLACRGGYVWVVTQATLLYGAKGNKPQSVVCVHFVTSGIE
ERDEIFSSSQLSTPSVVEAAPAACAAPAPAPLPAAAPAPATALTRPQSVTASLFKSVPQV
LVEPPDSPAPPADIRVNQYIRPESAAGAASFTLSPSISPSLSPALSPALSQVLSPALSQV
LSPDFSPNLSPALSPSQPDPPLLRPISATSRIFASSPSSATSTSALSPAPASPSSSASSP
TVFLRPQAATTKIFAPRTEDMNKGFLIFSEDEGLTMLKDEPEDLTHLAPTAGDVCVPLEG
PFLGDVFDDFMLSENYCPLLSDDNSNSKFFLYRDNDPTPGDLSPPGHCRHLLSPTVSPTL
SSTLSESPGDCSLPSLCSPSRAVDLDDNMSHFMSLSVDTGMTSLSDTDDDLSLRAPYIPM
GEDLPLIMSNDLMWGSSLPYKSSTSSSRSSSSSCPDDSGGGDNSNSSINSPLGSSRNCWS
PQPQTSSKPDMNSSLARLLQSDTLPNGHRQSASDLVDPCEVLGQIYSKKQSPAWSSGRGP
GRPSSHKTAAPPHTHKRGSSAMGQYLGAKRSRLNVAGSRSKKAQADLLHSTDSVLVLDGG
GHRPEHKSVPLPQPSDSVLMNLLGQDGIFKLPLQKKDAVVALGNLVASASSILRELAGDK
IPDDAPIVLQPSKPPESGQLRSPLVTPTVVGRDLLRKNSFSLLDPECMIPSLADLSQQDY
EVNAPVSSHGTLLQGEELLTALEMSGAANVLSMG
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaagaaatcttcgaaacctcgcaaggaaaggcgaaggaacacggagaagcga
aaggagaagtcacgtgacgcggcgcgcttccgccgcagccgcgagacggagatcttcacg
gacctgagcgatgccctgccgctgtcgcccggcgccgtggcgcacctggacaaggcgtcc
atcatgaggctcgccatctgctacctcaaagtgcgcagcctcatccacatggtgccggag
caggtgactcccaaggccgacatcatgaacgaccccctggtcatgagcgccatggagggc
ttcctcctggtgctgtccgccgacggcgacatggtcttcctgtccgagaacgtccacgag
tacctcgggctcaaccagctggacttgatgggccacagcatctacgagttcagccacccc
tgcgatcacgacgagatcaaggagatcctctcggagaagtcggtcgtgaatggcggccag
cgctccgtcatcccgcgctcctccttcctgcgcatgaagtgcaccctgacgagcaagggc
cgcaacgtgaacctcaagtcggcctcgtacaaggtgatccactacacgggccacatgctg
acgggcccggcacgcgtcaaggaggagagcgactctgacagcgccagcagctccggcgac
agcggcctggggcacggccgagtcagcagcgagaactgcctcgtggccatcggcgagccc
atcccgcacccctccaacatcgagatcccgctcgacaagcagaccttcctcagcaagcac
agcctcgacatgaggttcacttacgccgacgacaagatcggcgagtttttgggctacgat
cccagcgacctggtgggcaagtcgatgtacgagttccatcacgccatggacagcgaagtg
gtggagaaaggcttcaagtccttgttttccaaagggcagtgccagactgggcgcttccgg
ttcctggcctgccgcggcggctacgtgtgggtggtgacccaggccacgctgctctacgga
gccaagggcaacaagccgcagtccgtcgtctgcgtgcatttcgtcaccagtggaatcgag
gaacgggatgaaatcttctccagcagccagctgagcacgccctctgtggtggaggccgcc
cccgccgcctgcgcggcccccgctccagctccactgccggctgctgctccagccccggcc
acggccctgacgcggccccagtcggtgacggcctccttgttcaagtcggtgccccaggtg
ctggtggagcctccagacagcccagcgcctccggcggacatccgcgtcaaccagtacatc
cgccccgagagcgcggccggcgcggccagcttcaccctctcgccctccatctcgccttcc
ctgtcgcccgctctctccccagccctctctcaagtcctctccccagccctctctcaagtc
ctctctccagacttctctccaaacctctctccagccctctcccccagccagccagacccg
cccctgctccgccctatttccgcgacgagcaggatcttcgcttcctcgccgtcctctgca
acctcgacatctgcgctctcaccagccccggcatcaccctcgtcatcggcgtcctccccg
acagtcttcctgcgcccgcaggcagctaccaccaagatttttgcaccgcgcacagaggac
atgaacaagggattcctcatattctcggaggacgagggtctgaccatgctgaaggatgag
ccagaggacctgacgcatctggccccaacggctggggacgtgtgcgtccccctcgagggt
ccgttccttggcgatgtgttcgacgactttatgttgtctgaaaattactgccccttactt
agcgatgacaacagcaactccaagttcttcctgtaccgtgacaatgaccccacccccggt
gacctatccccaccgggccactgccgacacctgctctcccccactgtatcacccaccctc
tcttcaaccctctcagagagtcctggagattgcagcctaccatctttgtgcagcccgagc
agagcagtggatctggatgacaacatgtctcattttatgtccctttcggttgatactggt
atgaccagtttgtcagataccgatgatgacttgagcttaagagcaccttacataccaatg
ggtgaagatcttcctctcatcatgtcaaatgatctcatgtgggggtcttcattaccgtac
aaaagtagcaccagtagtagtagaagcagttcaagcagttgtccagatgatagtggagga
ggtgacaatagtaacagtagcattaatagtcctctgggcagctcacgtaactgttggtca
cctcaaccacagacttcgagcaaaccagatatgaattctagtttagcaaggcttttacaa
tctgacacattacccaatggccatcgacaatcagcttcagatcttgtagacccatgtgaa
gtgttgggccaaatttactctaaaaaacaatctcctgcatggagtagtggacgtggacca
ggtcgccctagttcacataaaacagcagctccacctcatacccacaaacgtggatcaagt
gcgatgggacagtacttaggggccaagcgtagtagattaaatgtggcaggaagtcgttcc
aagaaagcgcaagcagatcttttacactctacagactcagtattggtgttggatggtgga
gggcatcgacctgagcacaaatcagtgccattaccgcagcccagcgatagtgttctaatg
aacctcttgggtcaagatggaatatttaagctacctctacaaaaaaaggatgcagttgtt
gctttgggcaatcttgtagcatcagcatcatctattcttcgtgaactagccggtgacaaa
atcccagatgatgccccaattgttctacaaccaagcaaacctcctgaatctgggcaactt
agaagtccattggtcacaccgacagtagtcggtagagatctgcttcgcaaaaattctttt
tctttgttggatccagagtgtatgataccatcacttgctgatctaagccaacaagattat
gaggtgaatgctccagtttccagccatggtactctcctacaaggcgaggagttattgaca
gctttagagatgtcaggtgcagcaaatgttttgtcaatgggttag
DBGET
integrated database retrieval system
