KEGG   Frankliniella occidentalis (western flower thrips): 113204678
Entry
113204678         CDS       T07591                                 
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03420  Nucleotide excision repair
foc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113204678
  09124 Replication and repair
   03420 Nucleotide excision repair
    113204678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:foc04121]
    113204678
   03400 DNA repair and recombination proteins [BR:foc03400]
    113204678
Ubiquitin system [BR:foc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     113204678
DNA repair and recombination proteins [BR:foc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113204678
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_EML WD_LRWD1 Beta-prop_WDR35_TULP_N WD40_RFWD3 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_IFT122_2nd TriTu
Other DBs
NCBI-GeneID: 113204678
NCBI-ProteinID: XP_026275726
UniProt: A0A6J1SAJ7
LinkDB
Position
Unknown
AA seq 402 aa
MIHQIENLRIGVTDPLLFKTSEAYKRAKNLALSSHRDVENVFSSGVRTLDLDAEGRYLLS
GCSDGSIYIHDLYNFTGSPSFTANSVQVIDRNHRFAHKYSTECVQWYPQDSGLFVTGSMD
KSLKVWDSNRMRPVETVKFVGRIFQVHMSTKAISKCLVAVAGTESIVRLVDLTTGSCTHE
LRGHESAVLTCRWSPCEEFLLTTGGCDGRIIVWDARSGKSALRILDHNNGQVNYKNKGKL
KSHEVAVNGLCFTENGQNLISLGWDGRAKLWNMTSGKKEGVEYKAKPSEKSKSVQFDVAG
SSRKELVFIPSDGKILVYEVQTGELVRTLRGHYNEVNSCKFNTLYQELYSGAHDRNILIW
TPDLLQEAAYKDHVNIQSVSTNSSVRPVGEVTQDVWSSDEGD
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgatccatcagatagaaaatttaaggattggtgtcacagatccgcttctatttaaaaca
tctgaagcatataaaagagcgaaaaacttggctctcagcagtcatcgagatgtcgaaaat
gttttttcttcaggagtccgtacattagatttagatgctgagggtcgttaccttttatct
ggatgttccgatggcagtatttacatacatgatctgtacaacttcactggttctccaagt
tttactgcaaattctgttcaggtcattgacagaaaccaccgttttgctcacaaatatagt
acagaatgtgttcagtggtaccctcaagattctggtctctttgtcactggaagcatggat
aagagcctgaaggtttgggacagcaatcgaatgcgacctgttgaaacagtgaaatttgtt
ggacgcatttttcaagttcacatgtcaaccaaagccatatcaaagtgtcttgtagctgtt
gctggcacagaaagcattgtgagacttgttgatctaactacaggttcttgtactcatgaa
ttacgtgggcatgaaagtgctgtactaacatgtcgctggtcaccttgtgaagaattttta
ctgactactggaggctgtgacggaagaataatagtatgggatgcccgatcagggaagtca
gctcttcgaatccttgaccataacaatggacaggtcaactacaaaaacaaaggcaagctt
aaatcacatgaggttgctgtaaatggactgtgcttcactgagaatggccagaatctcata
tctttaggatgggatggccgtgccaaactttggaatatgacttcggggaagaaagaagga
gtggaatataaggcaaagccttcagagaagagtaagagtgttcagtttgatgtggcgggt
agctctagaaaagagttagtgtttattccctcagatggtaaaatactagtttatgaagtg
cagacaggagagttggtgagaacattgagaggacattataatgaagttaattcttgcaaa
tttaatactttgtatcaagagctatacagtggggctcatgatcgaaatattttgatctgg
actccagatttgttgcaagaagctgcttataaagatcatgttaacattcagagtgtgagt
accaatagttctgtgcgacctgtgggtgaggtaacccaggatgtatggagtagtgatgaa
ggagactga

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