Frankliniella occidentalis (western flower thrips): 113204746
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Entry
113204746 CDS
T07591
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113204746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
foc03000
]
113204746
Transcription factors [BR:
foc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
113204746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
DUF7026
Motif
Other DBs
NCBI-GeneID:
113204746
NCBI-ProteinID:
XP_026275813
UniProt:
A0A6J1S573
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MGLNQGDPDESVYQELCVKLNMDKDTADEAWQNYQRIRVNYLLEGNQLHWLACALYVSCR
KSTTPTVGRPGEVVEGNCVSLTRLLRLSKLSLIHFFNKCKKWADMASLPADFRGKIDSLE
RNFAVSREIFKKFQPIFKDLFQEAGPEPQQNLRTSRKQKNQPCTPARVFELTWTLFVCVK
VDYPDVRDDLVNSYHMLLACCDLIFGNALLADRRDLLNPVFPGLPKDFSSPDYQPPTNAP
CIIDKLCESHDGLPLEAKGIKAYCWKNHIKRLFEQRVLKGNSENFSGILDVNNFDYNLKA
INKQYEEHVLNVGDFDERIFLAEIKRLRSCLKRSQGFTTPSRPVLRALNVEGDAEQDIGT
STNHGIGDLSEKMHALRRLQTPNVSGCNQLIVSTPLTNRRYLRGAHDSNEVTPLITATQS
VNRLRSLLSGRSDAPSENLLEIFKSCSRDPTEKVLGFVSAIGQKFCERYSQQTSDQEKSS
NMSSMDFAKKRLQLGVTLYYKILENIITDERKQKPHLDFSNLLEQEVFHQTLLACCIEIV
IFAYNAPSRTFPYVLKALNVEPYYFYKVIEPIVRAEEQLSRDMIKHLNEIEEKILESMAW
QSESSLWDYIDSSGLPVPSCEDVSLPSQLTVDGDAGQHQATNPVLKRLSGAGDKGSASPI
SSVSAVERFNSPVSQAIPKKRLFDGELIKPGQSLLQSKVGIGGIQITTVKGENGQQYIPI
QYVPGANSVIISAQPSGSGSTVLKNKAPGASNSESGGEKKDDDKPKRTGSLSLFFRKFYH
LGSVRMQELCNHLQLTDAELKRKIWTCFQHAITNHVDLMRDRHIDQLLMCSVYVICKVTK
NDQTFTNVMKCYRMQPQASSHVYRSVLLKKVTEESGEETSAVSAPLPKALGSPTDAAGTS
NNFRGEVRGDLIKFYNEVFVTKMKAFAQKFCSDQNDSLPLSPLPVCKSQPSVPRRRVTDK
LPVFISSLNPQDVTVSPSKLLDYKFSRSPARDLRAINNMIQVDGTRKVAKRLLADDSTDE
ASLPKISANDLVSRKLHSIIGDRIGQSQV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgggtctaaatcagggggaccccgatgaaagtgtgtatcaagaattatgtgtgaagtta
aatatggataaagatacagccgatgaagcgtggcaaaattaccaaagaatacgagtaaat
tatctgctggagggtaatcaacttcattggctggcttgtgctctctatgtttcctgtcgg
aaatcaactacaccaactgttgggagaccaggtgaagtggtagagggaaattgtgtcagc
ctgacgaggctcctacgtctcagcaaattaagtttgatacacttctttaacaagtgtaag
aaatgggcagatatggctagtttgccagcagatttcagagggaagattgacagcttagag
aggaattttgctgtttcaagggaaatttttaagaagtttcaaccgatttttaaggacttg
tttcaagaggctggcccagaaccccagcaaaatctgagaacatcaagaaaacaaaagaac
cagccctgtacacctgctcgtgtatttgagctcacttggactctctttgtttgcgttaaa
gttgattatcctgatgtcagagacgacctcgttaattcatatcacatgctgttagcttgc
tgcgatctcatttttggaaatgcattgctagctgataggagagatcttctaaatccagtg
tttcctggtttacccaaggatttctcgagtccagactaccaaccccccacaaatgctcct
tgcatcattgataaattatgtgaaagtcatgatggacttccactggaagcaaaaggaata
aaggcatattgttggaaaaatcatattaagaggctttttgagcaaagagtactcaagggg
aattctgagaatttcagtggcatacttgatgtgaacaactttgattataatctaaaagca
atcaacaaacagtatgaagaacatgtattgaatgtaggagattttgatgagagaatattt
ttagctgaaattaagcgtttgcggtcgtgcctgaaaagaagtcaaggttttactacccca
tccagacctgtgctcagggctctcaatgtagaaggggatgccgaacaggatataggaacg
tccactaatcatggcattggcgacctctctgaaaaaatgcatgctttacgccgtttgcaa
acaccaaatgtttctgggtgtaaccaactgattgtttctacaccattaacaaaccggaga
tatcttcgaggagcacatgattccaatgaagtcactccactgataactgctacacaaagt
gtaaataggttacgttcattactctcagggcgttctgatgctccaagtgaaaacttattg
gagattttcaagtcatgctcaagggatcccacagaaaaagttcttgggtttgtgtcagcc
attggacagaagttctgtgagcgttactctcagcaaacatctgatcaggaaaagtccagc
aacatgtccagtatggattttgcaaagaaaaggttgcagcttggagtaacactgtactac
aaaattcttgaaaacataataactgatgagagaaaacaaaaacctcatctagatttcagt
aatcttctggagcaggaagtttttcatcaaactcttctagcttgctgtatagaaattgta
atttttgcctacaatgcaccaagtcgtacatttccttatgtattgaaagcgttgaatgta
gaaccatactatttctataaggttattgaacccattgttcgtgctgaagaacagctttca
agagatatgatcaagcatttgaatgagattgaggaaaaaatactggagtctatggcatgg
caatctgaaagttctctttgggattatattgattcatcgggtctccctgtaccatcctgt
gaagatgtctcacttccaagccaacttaccgtagatggtgatgcaggacaacaccaagcc
acaaatcctgtattgaagcgcctttcaggagctggtgacaaagggtctgcttcccctatt
tcatcggtttcggccgtagaacgattcaattctcctgtttctcaagccattcccaagaaa
cgtctgtttgatggtgaactaatcaaaccagggcaatctttgctccaaagcaaagtggga
atagggggaattcaaataacaactgtcaagggagaaaatggtcagcaatacataccaatt
cagtatgttcctggggctaacagtgttataatttctgcccagccatctggcagtggatcc
actgtccttaaaaataaagcacctggtgcatcaaactcagaatctggtggtgaaaagaag
gatgatgacaaaccgaagagaacaggctctctcagtttattctttagaaagttttaccac
ttgggttccgtgagaatgcaagaactgtgcaatcaccttcaactcacagatgctgagttg
aaacgaaaaatttggacatgcttccaacatgccatcaccaaccatgtagaccttatgcga
gaccgccacattgatcaattattaatgtgctcagtctacgtcatttgtaaagttacgaag
aatgatcaaacctttactaatgtgatgaaatgctacagaatgcaaccacaagctagctca
catgtgtaccgcagtgtgcttcttaaaaaagttactgaggagtctggtgaggaaacctct
gcggtatcagctcctcttccaaaagctttgggttcaccaactgatgctgctggaacctca
aataatttcagaggggaagtacgaggagatttaattaaattctacaatgaagtgtttgtt
acaaaaatgaaagcatttgcccaaaaattctgttctgatcagaatgattcacttcccctc
tccccactgcctgtatgcaagagtcagccaagtgttccaagaagaagagtaactgacaaa
ctgcctgtttttataagttctttaaaccctcaggatgtcactgtctcaccatctaaactt
ttggattataagttcagtcgtagcccagcaagagatttgcgagctattaacaatatgatt
caagtggatggcacccgcaaagttgccaaacgcttattggcagatgattcaacagatgaa
gccagccttcctaaaatttcagctaatgatttagtttctcgcaagctgcattctatcatt
ggtgataggataggtcaatctcaggtttga
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