Frankliniella occidentalis (western flower thrips): 113205234
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Entry
113205234 CDS
T07591
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
foc04147
]
113205234
00535 Proteoglycans [BR:
foc00535
]
113205234
00536 Glycosaminoglycan binding proteins [BR:
foc00536
]
113205234
Exosome [BR:
foc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113205234
Proteoglycans [BR:
foc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
113205234
Glycosaminoglycan binding proteins [BR:
foc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113205234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
113205234
NCBI-ProteinID:
XP_052130387
UniProt:
A0A9C6X787
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MRSLKGDKGDRGLRGPPGESIRGPPGPPGPPGPPGAFYGKGDAFPDEGRAYGRPNQMFGA
GSPGLQGPPGTCSCNLTSILGSMNLEMIPGPPGQPGIDGAAGIPGVSGLPGPPGERGAPG
SRGEKGDRGDIGATGPEGIQGQKGDPGRDGTPGTPGAPGPPGPPGTSEPNGGYDPSWNSR
SVLKDSVLGTGYGSSIGRPGSPGPKGEPGSSGSPGFKGERGVQGPKGERGELGARGAKGD
RGHQGPQGAQGFKGEPGSPGIDGQPGVPGDNGRPGSKGDKGDPGAVGSPGPPGPPGVAVY
NPEEAKFLGGGPSLLGEASSLPGPQGERGEPGVKGEKGDSGDRGLSGIPGINGVQGPAGE
KGEAGVPGPVGPPGLKGERGERGPPGAVTSVDGEVVVVKGEKGDGGKRGRRGRPGPPGVP
GKDGASGDMGLPGWQGLPGRPGPVGMPGLGFQGPKGEKGEPGEITNLLRHRGEPGLPGPM
GPPGPEGRPGPPGPPGPPSEVKYVPVPGPPGPPGPPGVTESRGHVFGGEQLHPRPGSGGG
IEGLNKAMRNRDSLGHGSSSPPVQEKTTRIVPGAVTYQNKEAMTSRSAETAVGTLAYIID
EEALLVRVNKGWQYVALGSILDVTTPPPPTTFHPHVRPPPLESSNLLVNTFYMAADQPAL
RMAALNEPYSGDMHGVSGADRACHRQAHRANMRGTFRAFISSRVQDLDSIVRPADRNLPV
INTRGDVLFKSWKELFAGKGGFLSQQHKIYSFNGRDILNDFAWPEKVIWHGAHMLGERAM
DAYCDSWQSDSADKFGLASSLLRGKLLAQERFSCNHRFAILCIEAVNPYLSRRRRRSVES
NDEDDDFLDEDEYEDTLKSVMDEND
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcctcaagggcgacaagggtgaccgcggcctgcggggtccgcctggagagtcc
atcaggggcccccctggcccgccgggcccgcccgggcccccgggcgccttctacggcaag
ggcgacgcgttcccggatgaagggcgtgcgtacggcaggccgaaccagatgttcggcgcc
ggttccccgggtttacaggggccgccggggacgtgctcctgcaacctcacctccatcctg
ggctccatgaacctggagatgataccgggccctccagggcagcctggcatcgacggggcg
gcagggattcctggagtctcgggcctgccggggcctcccggtgagagaggcgcgcccggg
tcgcggggcgagaagggcgaccgcggggacatcggcgcgaccgggccggagggcatccag
ggccagaagggcgacccgggccgcgacggcacgccgggcaccccgggcgctccgggacct
cccgggccacccggcacgtccgagcccaacggcggatacgacccgagctggaactcccgc
tcggtgctcaaggactcggtgctcggcaccggctacggctcctccatcggccggcccggc
agcccggggcccaagggcgagcccgggtcgtcgggcagccccggcttcaagggcgagcgc
ggcgtgcagggccccaagggcgagcggggcgagctgggcgcgcgcggcgccaagggcgac
cgcggccaccaggggccgcagggcgctcagggctttaagggcgagcccggctctccgggc
atcgatggccagcccggcgtacccggcgacaacggccgcccggggtccaagggtgacaag
ggcgacccaggtgcggtcggcagcccggggcccccgggaccaccaggggtggccgtttac
aacccagaggaggccaagttccttggcggcgggccttccctgctcggagaagcgtcctcc
ctgcccgggcctcagggagagcgtggtgagccgggcgtcaagggggagaaaggtgacagc
ggagaccgtgggctttcgggcatacccggcatcaacggcgtgcaggggccggcgggcgag
aagggcgaggcgggcgtccccgggccggtgggcccaccgggcctcaagggcgagcgtggc
gagcgggggccgccgggtgccgtcacctcggtcgacggcgaggtcgtggtcgtcaagggc
gagaagggcgacggcgggaagcgaggccggcggggaagaccaggtcctccgggcgttccc
ggcaaggacggtgcgtcgggtgatatgggacttcctggatggcaggggttgcctggacgg
ccgggtcctgtgggaatgccgggactaggatttcaaggtcctaaaggggaaaagggggag
cctggagagattaccaacctgcttcggcatcgtggggaacccggacttccagggccaatg
ggtcctcctggaccagagggtagaccagggcctccaggtcctccaggacctccatcagaa
gttaaatatgtgcctgttcctggcccgcctggcccgcctggcccaccaggtgttacagaa
tctcgtggtcatgtttttggtggcgagcagttacatcctagacctggctcaggaggagga
attgaaggactgaataaggccatgaggaatcgagactcattaggacatggctcttcttcc
ccacctgttcaagaaaaaacgacaaggattgtaccgggtgctgtaacttaccaaaataaa
gaggctatgacaagtagatcagcggaaacagctgtgggtacgcttgcatacataattgat
gaagaagctcttttagtgagagtcaacaaaggatggcagtatgttgctttgggatctatt
ttagatgtgaccactccacctccaccaactactttccaccctcatgtaaggcctccccca
ctggaatcttccaacctgcttgtcaacaccttctacatggctgctgatcaacctgctctc
cgaatggccgccctgaatgagccctattccggagatatgcatggagtaagtggtgcagat
cgtgcttgccacagacaagctcacagagctaacatgcgaggaacctttagagcatttata
tcatctcgggtacaagatcttgactcaattgttcggcctgcagacagaaacttgcctgtt
atcaatacaaggggtgatgttctttttaaatcatggaaggaactttttgctggtaaagga
gggttcttgtctcaacagcataagatttacagctttaacggaagagatattttgaatgat
tttgcttggcctgaaaaagttatatggcatggtgcccacatgttaggtgagcgagcaatg
gatgcttattgtgactcatggcaatcagacagtgctgacaaatttggactcgcatcttcc
cttctaagaggaaaacttctagctcaagaacgtttttcttgtaatcatagatttgcaatt
ttgtgtatagaagcagtgaacccttacttgtcgagaagacgacgcagaagtgttgagagc
aatgatgaggatgatgatttccttgatgaagatgaatatgaagacactttaaaatctgtc
atggatgaaaacgattaa
DBGET
integrated database retrieval system
