Frankliniella occidentalis (western flower thrips): 113205462
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Entry
113205462 CDS
T07591
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113205462
09122 Translation
03013 Nucleocytoplasmic transport
113205462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113205462
03041 Spliceosome [BR:
foc03041
]
113205462
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113205462
Spliceosome [BR:
foc03041
]
Complex C
Other components
EJC/TREX
113205462
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113205462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
113205462
NCBI-ProteinID:
XP_026276890
UniProt:
A0A6J1SCB3
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MADTKMSPDIWKSWDRQGKVEFMSKCTEALKSCDGSPVFQSGKKTSDLTRWIFQLLRAAL
NGQVKKESTIAFLEEFSKLHSDLPALILDIFCILDAETGGVELSEERMCFNFLLKESEKF
LSDSLMKERAEIDTLQEVGILRNRNFYTKFIKVKTKLYYKQRKFNLFREESEGYAKLIVE
LNQGLSGDPVVTLEAIKSLIGCFNLDPNRVLDVMLESFECHPHEHEYFVPLVRSYMHDSK
ILCDVLGFKYSLYQGPGAERTPKSLFLLTAIMLQYELITLEDLLVWLVPDDASIVKEWEA
EMLDARDQIRKMNVVSVNKDEKKEEVPEEKESPLEKFAANQKFGLCEALLNIGAWPVVKD
LCKRLPDHFLIEQPTISKAMCNILHVIVDPLYKKECSLGPKIKGRPISVPQIILAIPQVN
TFEELKTNAIPMFQLLGPYIYADPILLSKLIRICKSSLSQLGLDGKLSPPSNASMYYEVM
TLLDESILPALSFLDGNCCIAEDVWNVLKLYPYAHRYSMYGRWKNESYLHHAKLMIRHAE
AHKKVKSIMKRVSKENIKQIGRLIGKMTHSAPGFIFDYMLLQIQLYDNLIGPVVDSLKYL
TSLSYDMLAYCLVECLTQADKLRDRVKHDGTSISQWLQSLSSFCGAIFKKYNIELSGLLQ
YVANQLKAQRSLDLLILNEIVHKMGGIEAVEDMTTEQLDAMAGGEILKGEAAYFNQVRNT
KKSSTRLREALADQNLAVALCLLMAQQRYCVVYHETESSHLKLVGRLYDQAQDTLVQFGT
FLSQTMTVEEYVNRLPPIDSLLLVYHIHTDVAFFLARPMFNHAIALKYDVLRKAEYDQLR
KADPNLKKLTNAQKQQKYVEAASEVMGPIVESVKPLHPMKLWEDVSPQFLVTFWSLTMYD
LYVPAEAYQKEIAKLKQEAAKAVADMPSSKSKKEQERYLALADKLQDEKKKQQEHVDRVH
ARLRHEKESWFLSRSAKAAKNETITQFLQLCLFPRCIFTMADAMYCAKFVHTIHSLKTAN
FSTLLCYDRLFCDITYSVTSCTENEANRYGRFLNSMLETVMRWHSDKAIFEKECANYPGF
VTKYRVSNQFSEACNLVGYENYRHVCHKWHYKITKAMVVCLDSKDYVQIRNSLIILRNIL
PHFPVLIKLGHIIQKKLEKICEEEKNQRQDLYALAMSYIGMIKSKTATMIPESSFHQVGD
KQARQEAAAAAAAAAAAAAKPPGAAAPSASEPQKSINGENKGSAPKETREREREKDSEPK
EKVPRKEKKERDDREEKWDEDWREKRKEKEDRLSRDDRFMENEDRQDRDRDRGRDRDRDR
EREKEREKDSHIHSIDDRELSSVSNSSAGSGHRRSQEPIDPDRDVKRRKTEASSSSKSSK
HDDRKTAQQHITAAQLDILDEVTGAIGKERRERGSRSKKIAPDSDEKELRKERKVGRKRG
ERAVDDPTIELKRRKDEASKIAHQNGDQVDTHRDKHRYSREKSPYGSARERPHDHLEHSE
TREKHRRNLDSKRR
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacgaagatgagccccgatatatggaaatcgtgggacagacaaggaaaagtg
gaattcatgtccaaatgtacagaagccttaaagtcatgtgatggaagtcctgtatttcag
tcaggaaaaaagacttcagatttgacccgatggatatttcaattactgagagctgccctc
aatgggcaggtgaagaaggaatctactattgctttcctagaagagttttcaaaattgcac
tccgacttaccagcactgattttagacatattctgtattcttgatgccgaaactggaggt
gttgaactttcagaagagcgaatgtgtttcaattttcttttgaaggagtcagaaaagttt
ctgtcagacagtctcatgaaagaaagagcagaaattgatacacttcaagaagttggaatt
ttaagaaaccgaaacttttataccaagtttataaaagtgaaaacaaagctatactacaaa
caaagaaaattcaacttatttcgggaagaaagtgaaggatatgccaagttaattgttgaa
cttaatcaaggtctctctggtgaccctgtggtaacattggaagccattaagtcattgatt
ggttgcttcaatttggatcctaatcgagtgttggatgtgatgttagagtcttttgaatgc
cacccccatgaacatgaatactttgtgcctcttgtacggtcttacatgcatgactcaaaa
atcttgtgtgatgttctgggattcaagtattccttatatcagggtccaggagctgagaga
actccgaagtcactattcctcctcacagctattatgcttcagtatgaactgatcactctt
gaagatctgctagtttggttggttccagatgatgcttcaattgtgaaggaatgggaagca
gaaatgttagatgctagagaccaaatcagaaagatgaatgtggtgtctgtaaataaggat
gagaagaaagaggaagtgcctgaagaaaaagaatctcctttggagaagtttgcggcaaat
caaaagtttggattgtgtgaagctcttctcaatattggcgcatggcctgttgtgaaagac
ttgtgtaagaggttgcctgatcatttcttgatagaacaacccactatttcaaaagccatg
tgtaacattttacatgtaatagtagaccctctgtacaagaaagaatgttcacttggtccc
aagataaaaggtcgcccaatatctgttcctcaaatcattttggcgatacctcaagttaat
acttttgaagaattgaaaaccaacgccatacccatgttccaactacttggcccgtacatt
tatgctgacccgattttgttatctaaacttatccgcatttgtaaaagttccctatcacag
cttggtttggatggcaagttatcccccccttccaatgcttccatgtactatgaagtcatg
acactgttggacgaatcaattcttcctgcactctcattcctggatggaaattgctgtatt
gctgaagatgtttggaatgtgttaaagctatatccctatgctcataggtacagtatgtat
ggacgctggaaaaatgagtcttaccttcaccatgcaaagcttatgatacggcatgccgaa
gcccacaaaaaggtcaaatcaattatgaaaagagtcagcaaagaaaacatcaaacagata
ggaagattaattggcaaaatgactcacagtgcacctggattcatatttgactatatgctt
ctacaaattcagctgtatgacaacttaattggacctgtggttgattcccttaagtacttg
acatctctatcatatgatatgttagcgtattgcttggttgagtgtcttacccaggctgat
aagttaagagatcgtgttaagcatgatggcacttctatatcacagtggctgcaaagtctt
tcatcattttgtggagccatatttaagaagtacaacattgagttgtcaggccttttacag
tatgttgcaaatcagctcaaagcccaaagaagtttggatcttcttatcttgaatgaaata
gtccataagatgggaggtattgaagctgttgaagacatgacaacagagcagttggatgcc
atggctggaggggaaatcctgaaaggagaggctgcgtacttcaaccaagtgcgcaatact
aaaaagtcatctactcgtcttagggaagcactagctgatcaaaatcttgctgttgcactc
tgtttattgatggctcagcagcgttactgtgttgtgtaccatgaaactgagagctctcac
ctcaaacttgtcggtagactttatgaccaagcccaagataccttagttcaatttggcacg
tttttgtcccaaacaatgactgttgaggaatatgtcaaccgtcttcctccaattgatagc
ttactattagtctatcatattcatactgatgtagcattcttcttggcaaggcccatgttt
aatcatgctattgctctaaaatatgatgtcctgcggaaggctgaatatgatcagttgaga
aaggcagaccccaacttgaagaaactaactaatgctcaaaaacaacaaaaatatgtggag
gctgcttctgaagtcatggggcctatagtagaatctgtgaaaccgctccatcctatgaag
ttatgggaagatgtatctccacaattcctagttactttttggtctcttactatgtatgat
ttgtatgtacctgctgaggcatatcagaaggaaattgcgaaattaaagcaagaagctgct
aaggctgtagcagatatgccatctagcaaaagcaagaaagaacaggagaggtatcttgca
cttgcagataaattacaagatgaaaagaaaaagcaacaggagcatgttgatagggtacat
gcccgcttaagacatgaaaaagaaagttggttcctttcacggtctgcgaaggctgctaaa
aacgagaccataactcaatttcttcaactttgcctgtttccacgctgtatatttactatg
gctgatgcaatgtactgtgccaagtttgtgcatacaatccatagtctgaaaactgccaac
ttttccacattgttgtgctatgacaggcttttctgtgatatcacttattctgttacctct
tgcactgaaaatgaagccaatcgctatgggagattcctcaattctatgttggaaactgtg
atgagatggcactctgataaggcaatatttgaaaaggaatgtgctaattatcctggcttt
gttaccaagtacagagttagtaaccaattttctgaagcctgcaatcttgtaggttatgaa
aactaccgacatgtttgtcataaatggcactacaagataacaaaagccatggtagtatgt
ctagactccaaggattatgttcaaatacgtaactctctcatcattttgaggaacatcttg
ccacacttcccagtgttaataaaattaggccacatcatccaaaagaaactggaaaagatt
tgtgaggaagaaaagaatcaaagacaagatttgtatgctctggctatgagctacataggt
atgattaaatctaaaactgccaccatgattcctgagtcaagcttccatcaagtgggagac
aagcaagctcgccaagaagctgcagcagctgcggcggccgcagcggcagcggctgccaaa
ccacctggggcagcagctccatctgcttcagaaccacaaaagtccatcaatggagagaat
aagggaagtgcccctaaggaaacccgtgagcgggaacgtgagaaagatagtgagcccaaa
gagaaagtacctaggaaagaaaagaaggaacgggacgacagggaggagaaatgggacgaa
gattggagagaaaagagaaaagaaaaggaagaccgtctttccagggatgaccgtttcatg
gaaaatgaggacagacaagatcgagacagggatagaggccgtgatagagatcgtgacagg
gaacgcgagaaggaaagggaaaaggattcccatattcattcaatagatgatagagaacta
agctctgtcagtaatagttcagcaggctctggtcatagacgaagccaggagcccatagac
cctgatagagatgttaaaagacggaagaccgaggccagctcttcctcgaagagctctaaa
catgatgatcggaaaacagcacagcaacatattacagctgctcagttagatattttagat
gaagtgactggtgctataggaaaagaaagaagggagcgtggttcccgcagtaagaagatt
gctcctgattctgatgagaaagaattgcgcaaagaaaggaaggttggaagaaaacgggga
gaaagagctgttgatgatccgactatagagctcaaacgaagaaaggatgaagcatcaaag
attgcccaccaaaatggtgatcaagttgacactcatcgagacaaacaccgttattcaagg
gaaaaatccccttatggaagtgctagggagagaccacatgatcaccttgaacactcagag
acaagagaaaaacaccgtaggaatctggactcaaaaagaagataa
DBGET
integrated database retrieval system
