Frankliniella occidentalis (western flower thrips): 113205466
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Entry
113205466 CDS
T07591
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
foc03015
mRNA surveillance pathway
foc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113205466
09122 Translation
03013 Nucleocytoplasmic transport
113205466
03015 mRNA surveillance pathway
113205466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113205466
03041 Spliceosome [BR:
foc03041
]
113205466
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113205466
Spliceosome [BR:
foc03041
]
Complex C
Other components
EJC/TREX
113205466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Cornifin
RRM_1
Motif
Other DBs
NCBI-GeneID:
113205466
NCBI-ProteinID:
XP_052123617
UniProt:
A0A9C6WPJ3
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MRRVSTRTRAKKADSDDAPPAPRPTRTRRRKKSESSSEQDSESEEEVMPTPKSRRAAPPP
EERPVPSTPGGSRTRRSSRRLEPAVEEVKPVEVNVDTDADNNADRDSNGSNETEADSSTV
WKVQNSNGSGTGIAKLKLCRSGPIDQVEAPSPRKRRGARDSVMSTVVEEAVAQPSPTPEP
DSSGLTGKARAARRVEVESKGTETSSSSSSSSSSTTSSSSSEKSRASTPDKAETEPVEEN
EDEDSKDAEEKDEEEEEEDDDDDDVQIIRDDNKEDSAAASEISEEGNSVDLPSEMADDAG
PVSVPSKSSEEPDEEASSPEVDKSDADSNEPHTLVDDTSSKAASYKVEVLSVRPLDKHKD
GGSGAKPGASKDETEKAVLSTVDEKTLSAPVRKPAPAVAEKPAAAVAEKPEPVVEKKPEP
VVEKKPEPVVEKKPEPVVEKKPEPVVEKKPEPVVEKKHEPVVEKKPEPVVEKKPDPVVEK
KPEPVVEKKPEPVVEKKPEPVVEKKPQPVVVEEPKPVVVVKLAPVTVEKHALPVEEKLTP
ALKEKPVPEEALPKDTVKQQSVLKTDDADKATAQTRSIAVAKDDSLPVKAVKETIVTDKV
VLKEPLKVASATLTKGSETDARKSSEENKSSSSQIAVSKIGEKSSSKSDQKVEPEKPKLE
EKTASSKVPAPTAQIPVEDDQSDDEPVMDLAPGSPVEPDPEMAEDEAVEAKPVEKPHKRR
SRRRSSSASSSQSSSSDSDSERPVIRQKKRSLSKDSDDQSSKKIQVKRRSTGKEEDKKVH
KDTVKPEPVKEEAPAPPTRLRRKPLPSVEQKGKVSLKRNVSISEEKEDKDSSPTSEAEAP
PGEILVGENKENSSSTPTPEPETKPVEQPVARKRRWGSCKSIKKSVLCISSDPLKNLIPD
AKPVAESEVHLAFEEGEVNDEDERPSKRDRSKDKLLVDRPLPPPSVPLPENTRIVVHTSM
EVEERKIERKISVASEGSMATRTKSPTLSKHRTSTVLYITNLVRPFTIGQLRELLSRTGK
IVEGGFWINGIKSQCYVEYEDEDQAVETRHALHEVHWPISNRKALHVEFAKKEDMLRAQA
ETVGEPVISRKSQHVSDTHRERKDSEERVKIVQSVREWDLGKVADQSSELRESVQEDRKK
KDDDRRVRREKRSVSPSHEGPARKAKRNEEPAPAKLLDDLFRKTKTTPCIYWLPLTPQQI
SEKEEMRRKHMAEHERLRAEMRRAHERNMQRGPGGPGGLGGPGGPGGRDRDRDRERERDR
DRERERDRDRDRERERDRKDRRRGSKDK
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgcggagggtatccactcgaaccagagccaaaaaggctgatagcgatgatgctccacct
gcacctcgaccaacaagaactaggcggcgcaagaaatctgagtcttcatctgagcaagat
tcggaatctgaggaggaggtcatgcctacaccaaaatcgcgaagagcagctccacctcca
gaggagagaccagtcccgagcacacctggtggaagtcgcactcgaagatcctcacgcaga
ctggaaccagcggttgaagaagtcaaacctgtagaggtgaatgttgacactgatgctgac
aacaatgctgaccgtgattcaaatggatcgaatgagactgaagccgactcaagtactgtt
tggaaagtccaaaattccaatggatcgggcactggcattgccaaactgaaattatgccgt
tctggaccaattgaccaggtagaagctccctcccctcgtaagagaagaggggctcgagat
tcagtgatgagcactgtagtagaagaagctgttgcgcaaccaagtccaacaccagagccc
gattcatctggtttaacaggcaaagcacgagcagctagacgtgttgaagtggaatctaaa
ggaactgaaacttcttcatcatcgtcctcatcatcttcttcaactacctcctcttcgtcc
tcagaaaagtcacgagcatccacacctgacaaagctgaaacagagcctgttgaagaaaat
gaagatgaagactctaaagatgcagaagaaaaagatgaagaggaggaggaagaagatgat
gatgatgatgatgttcagatcatcagggatgacaataaagaagattctgctgctgcctca
gaaatatctgaggaaggtaattctgttgatttaccctcagaaatggcagatgatgcaggt
ccagtttctgttccctctaaatcatctgaagagcctgatgaggaggcctcctctcctgaa
gttgacaaatcagatgcagatagtaatgaaccacatactcttgttgatgatactagctcc
aaagcagcatcttataaagtggaagtcctatcggtcaggcccttggacaaacataaggat
ggaggatcgggtgccaaaccaggtgcttcaaaggacgaaactgaaaaagccgtactgtca
acagtagacgagaaaacactgtctgcgccggtaagaaagcctgccccagcggttgccgag
aaacctgccgcagcggttgctgaaaaacctgaaccagtggtggagaagaaacctgaacca
gtggtggagaagaaacctgaaccagtggtggagaagaaacctgaaccagtggtggagaag
aaacctgaaccagtggttgagaagaaacccgaaccagtggttgagaagaaacacgaacct
gtggttgagaagaaacctgaaccagtggttgaaaagaaaccggatccagtagttgagaag
aaaccggaaccagtggttgagaagaaaccggaaccagtggttgagaagaaaccagaacca
gtggttgagaagaaacctcaaccagtagttgtggaggaacccaagccagtggttgtagtc
aaacttgcacctgtaactgtggagaaacatgcacttccggttgaggaaaaactcacacca
gcattgaaagagaaacctgttccagaagaggctttaccgaaagatactgttaaacaacaa
agtgttttaaaaactgacgatgcagacaaagcaactgcgcagaccagatcaattgctgtg
gctaaagatgacagtttaccagtgaaagctgttaaagagacgattgtgactgacaaagtt
gttctgaaagaaccattaaaggttgcatcagctactctgacgaagggaagtgaaactgat
gcacggaagtcatctgaagaaaacaagtcttcaagcagtcaaatagctgttagtaaaatt
ggagaaaaatcaagttctaagagtgaccaaaaagttgaacctgagaagcctaaattagag
gagaaaactgcctcatcaaaggtaccagctccaacagctcagattcctgttgaagatgac
caatcagatgacgaaccagtgatggacctagctcctgggtcaccagttgaaccagatcca
gaaatggctgaggatgaagcagtggaagcaaagccagtggagaaacctcataagagaaga
agtcgacgaagatcaagcagtgcttcttctagccaaagctctagttcagattcggattct
gaaagaccagtaattcgacaaaagaaaaggagtttgagcaaagatagtgatgaccagtct
tcaaagaaaattcaggttaagcgtcggtctacaggcaaggaagaagataaaaaagttcat
aaggatacagttaaacctgaacctgtgaaggaagaggcaccagctccaccaacaaggctg
cgtaggaaacctttgccttctgtagaacagaaagggaaggtttctttgaagagaaatgta
tccatatctgaggagaaagaggacaaagattcatcaccgacatcagaagctgaggcacct
cctggagaaatattggttggggaaaacaaggagaattcatcttctacccccactcctgag
ccagaaactaaacctgtagagcagccagtggctcgcaagcgccgatggggctcttgtaaa
agcatcaaaaagtctgtgctatgtatatcatcagatcccctcaagaatcttattccagat
gccaaaccagttgcagaaagtgaagttcatctagcttttgaggaaggagaagttaatgac
gaagatgaaagaccctctaagcgagacagaagtaaagataaactgttggtagatcgtcct
ctcccaccacctagtgttcctttaccagaaaatacacgaattgttgttcatacctctatg
gaagttgaagaaagaaaaattgagcgcaaaatatctgttgcaagtgagggttcaatggcc
acaagaacaaagtcacctacattatcaaaacatcgaacttcaactgttctttacataaca
aatttagtgagacctttcactattggtcaattgagggaacttctatcacgaactggtaaa
attgttgagggaggcttctggattaatggcattaaatcacaatgctatgttgagtatgaa
gatgaggatcaggctgttgaaacaaggcatgcactgcatgaagttcactggccaatctcc
aaccgcaaagcgttacatgtggaatttgccaaaaaggaggacatgttaagagcacaagct
gaaactgtaggggaaccagttatttccagaaaatctcaacatgttagtgacactcataga
gaaagaaaagattctgaagagagggtcaagattgttcaatctgtgcgggaatgggatctt
ggaaaagttgccgatcagtcctcagagctgagggaatctgttcaagaagataggaaaaag
aaagacgatgatagacgggttagaagagaaaagcgctcagtgtccccgtctcatgagggc
ccagctcgcaaagccaaacgaaatgaagaacctgcccccgctaagctccttgatgactta
ttccggaaaactaagacaaccccctgtatttattggttgccgctcactcctcaacaaatt
tcagaaaaagaggagatgcgccgcaagcacatggctgagcacgagcgcctgcgcgcggag
atgcgtcgagcgcacgagcggaacatgcagcgggggcccggggggcccggagggctcggg
ggacccggcggccctgggggtcgcgaccgagaccgagacagagaaagggagcgggaccgc
gatcgcgagcgtgagcgcgaccgggaccgcgaccgcgagcgcgaacgggacaggaaggac
aggcgacgagggagcaaagacaaataa
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